Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2548 ATGAATTGCTTGAGCTCAATCTGTTTCAAACCTTGTGTTCCTTCCAAGGTGCTTTATCCCAGAACCAGCTCCACAAAATTCACAACCATGGTTCGTGCCAGTCTTCAAGATCCTCAACCACCCAACACTAGCCAGCAACAACAGCTCAACCTCTCCGTTCTTCGCTTCACACTGGGGATACCTGGGTTTGATGAATCCTACTTGCCCAGATGGATTGGTTATGGCTTTGGTTCGCTTTTGCTCTTAAATCACTTTCTTGGTTCTGACTCAGCCACTGTTACACCAGCACAGCTTAGTACAGAGGTTTTGGGTATGTCATTGGCTTCATTCTCTATTGTGCTGCCTTACCTTGGCAAATTCCTCAAGGGTGCCCAACCAGTGGATCAGACGACTCTACCAGATGGAACGCAGCAAATATTTGTCATGTCAACAGATATAGTGGATGGATTGAAGGAGGACCTGGCTTGGGCGTCGTACATTTTGCTGTGCAATTCGAATGCCATTGCTGCGCTAATTTTTATTCAAGGAGATATATGTGCAAGGGGCTACTGGAACATAACAGACGATTCATCAACAGAAATTCTACTTGGTTTTTTTAAGAAAAAAGTTGAAAATGCTCGCCTCTATGATTTGAAAGACACCCTATATTTTCCTCAAGATGCAGATTCTGACTTTCAGGATCTGGTACCTAAAGGAACTAGCTCTCTACTGGTGCAACCAGTGTTACAAGCTTCTATCGATAATGCTACTGGCTTGCAAAAACCTGTGGGATTTATTCTGCTGTCCTCAACCTTGAGGTATGCATTTAGTATGAAAGACAGAGCCTGGATTGCAGCTGTGGCCAACAAACTAAGAGCATGGGTCTAG 867 0.4406 MNCLSSICFKPCVPSKVLYPRTSSTKFTTMVRASLQDPQPPNTSQQQQLNLSVLRFTLGIPGFDESYLPRWIGYGFGSLLLLNHFLGSDSATVTPAQLSTEVLGMSLASFSIVLPYLGKFLKGAQPVDQTTLPDGTQQIFVMSTDIVDGLKEDLAWASYILLCNSNAIAALIFIQGDICARGYWNITDDSSTEILLGFFKKKVENARLYDLKDTLYFPQDADSDFQDLVPKGTSSLLVQPVLQASIDNATGLQKPVGFILLSSTLRYAFSMKDRAWIAAVANKLRAWV* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2548 288 PANTHER PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, CHLOROPLASTIC 25 285 IPR044970 GO:0010190
Lja2g2548 288 Pfam Cofactor assembly of complex C subunit B, CCB2/CCB4 68 284 IPR021325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2548 Lja-Chr2 33843447 33848217 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2548 - - gmx:100817953 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2548 2 33843447 33848217 Lja2g2548 2 33843447 33848217 ECH