Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2544 ATGATGAGGATGAAGAATGGTAAGACAAATGGGCTTTCTCCCATCATGAATGGAAGCTCAGCTGTTAGCAGAGCTGAACCGGGTTCAAAGGAATGGGAGATGAGGCCGGGTGGAATGCTGGTTCAGACGCGAACCGCTGACTCGGATCGGATCTCAGTGTCGGTTCCCATGATCAGAGTCAGGGTCAAGTATGGTTCAATTTACCATGAACTCAACATTAGTTCCCAAGCTTCATTTGGGGAATTGAAGAAAATGTTGTCAGGGCCAACTGGTTTACACCACCAAGATCAGAAGCTATTTTACAAAGATAAAGAGAGGGATTCAAAAGCTTTCCTTGATGTGGTTGGAGTGAAGAATAAATCAAAGTTGGTACTGGTGGAAGACCCTATTAGTCAAGAGAAAAGGTTGTTGGAGATAAGGAAGAATGCTAAGATGGAGAAAGCTGCAAAATCTATCTCAGAAATCAGTTTGGAAGTAGATAGGCTTGCAGGGAGGGTATCTGCTTTTGAATCAATAATTAGCAAAGGTGCGAAAGTTGCAGAAACAGATTTGCTTAGTCTGGTTGAGCTTTTGATGAATCAATTACTTAGATTGGATGGTATAACAGGTGATGGAGATGTGAAATTGCAGAGGAAAATGCAGGTCAAAAGAGTTCAAAAGTATGTTGAAACTCTGGATGTGCTGAAAGTTAAGAACTCAAATGGACAAAGAATTGGACCAATTAAAGAGCAACCACAAACACATTCAAATGGGCATCACAGGTTAGCTCCAATTCAGGAGCAGCAAGAAGAACAACCAAGGAACTCAAATGGGCACTCCCAAGTATTTCAACAACAGCAACAGTCAAATCATTCTACCTCAGGAGTTGTAGTCACCACAAAATGGGAGACATTTGATTCAATCCCACCATTAATCCCAGTTGAATCAACATCCACAACCCCTGCAGTGAACAACAACAATTCAGGTCCTCCCAAGTTCAATTGGGAATTATTCAACTAA 999 0.4164 MMRMKNGKTNGLSPIMNGSSAVSRAEPGSKEWEMRPGGMLVQTRTADSDRISVSVPMIRVRVKYGSIYHELNISSQASFGELKKMLSGPTGLHHQDQKLFYKDKERDSKAFLDVVGVKNKSKLVLVEDPISQEKRLLEIRKNAKMEKAAKSISEISLEVDRLAGRVSAFESIISKGAKVAETDLLSLVELLMNQLLRLDGITGDGDVKLQRKMQVKRVQKYVETLDVLKVKNSNGQRIGPIKEQPQTHSNGHHRLAPIQEQQEEQPRNSNGHSQVFQQQQQSNHSTSGVVVTTKWETFDSIPPLIPVESTSTTPAVNNNNSGPPKFNWELFN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2544 332 CDD Ubl_AtBAG1_like 57 126 - -
Lja2g2544 332 ProSiteProfiles BAG domain profile. 151 229 IPR003103 GO:0051087
Lja2g2544 332 PANTHER BCL2-ASSOCIATED ATHANOGENE 4 318 IPR039773 GO:0051087
Lja2g2544 332 MobiDBLite consensus disorder prediction 1 33 - -
Lja2g2544 332 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 3 4 318 - -
Lja2g2544 332 MobiDBLite consensus disorder prediction 309 332 - -
Lja2g2544 332 MobiDBLite consensus disorder prediction 309 326 - -
Lja2g2544 332 ProSiteProfiles Ubiquitin domain profile. 58 126 IPR000626 GO:0005515
Lja2g2544 332 Pfam BAG domain 152 226 IPR003103 GO:0051087
Lja2g2544 332 SMART BAG_1 151 229 IPR003103 GO:0051087
Lja2g2544 332 Gene3D - 56 127 - -
Lja2g2544 332 Gene3D BAG domain 128 233 IPR036533 GO:0051087
Lja2g2544 332 SUPERFAMILY Ubiquitin-like 46 132 IPR029071 -
Lja2g2544 332 MobiDBLite consensus disorder prediction 260 288 - -
Lja2g2544 332 MobiDBLite consensus disorder prediction 10 24 - -
Lja2g2544 332 SUPERFAMILY BAG domain 111 233 IPR036533 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2544 Lja-Chr2 33734875 33738016 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2544 - - vun:114181975 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2544 2 33734875 33738016 Lja2g2544 2 33734875 33738016 ECH