Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2510 ATGGCGTTAAAGGACACGTTTTACATATCCCATGGATCACCCACTTTGTCCATAGACGAGTCCCTTGTGGCTAGGAAGTTCCTCCAATCGTGGAAGAAGGAGGTGTTTCCGCCGAGACCCACTTCCATTCTTGTCATCTCCGGCCATTGGGACACCGCTGTCCCCACCGTTAACGTTGTTGATTCCACCAACGACACCATCTATGACTTCTATGGCTTCCCCAAACCCATGTACCAGCTTAAATATCCAGCACCTGGAGCTCCTCATTTGGCAAAGAGGGTGAAGGAGCTACTGAAAGAAGGTGGTTTCAGCCGCGTCGATGAAGATAAAAAACGCGGCCTCGACCACGGTGCTTGGGTTCCACTCCTTTTGATGTATCCAGAAGCTGACATCCCAGTTTGTCAGCTATCTGTTCAATCTAACCTGGATGGGACTCATCATTATAACATAGGAAAGGCACTGGCCCCTCTTAAAGATGAAGGTGTACTTATAGTGGGTTCTGGAAGTGCAGTTCACAACTTGAGAGCACTCGAGCGCCACGCCACTGTTGCGGCGCCCTGGGCTGTAGAGTTTGATAATTGGCTGAAAGAAGCTCTTCTTGAAGGAAGATATGAAGATGTGAATCACTATGAACAAAAAGCACCACATGCAAAAAAGGCTCATCCTTGGCCGGATCACTTTTACCCACTGCATGTTGCTATTGGTGCTGCTGGTGAAAATTCAAAGGCCAAACTCATCCATAGCAGCATTGACTTGGGAAGTCTCTCTTATGCCTCTTACCAGTTTACATCAGATCCAAGGAAGGAGAAGGAGACAGAAATCGCTAAAAAAACAGAGGAGAATATTAATAATAATAGTATTATGGCGTTGAAAGAGACATTCTACATATCCCATGGATCACCAACTCTAGCAATAGATGATAGCATCCCAGCATGGAAGTTCTTGAATTCATGGAAGGAGGAGGTGTTTCCACATCGACCCTCTTCCATCCTCATCATCTCCGGCCACTGGGACACCCATGTCCCCACCGTCAACGCCGTTGACCGGAATGACACCATCTACGATTTCTATGGTTTCCCCAAAAACATGTACAAGCTCAAGTACCCAGCACCAGGTGCTCCACACTTGGCAAAGAGGGTGAAGGAACTACTCACAGCATCAGGGTTCAGCCGTGTGGATGAAGATAGGAAACGTGGGCTTGACCATGGAGCTTGGGTTCCTCTCATGTTGATGTACCCAGATGCAGACATCCCAGTGTGTCAACTCTCAGTCTCATCAAGCATGGGTGGTACTTATCACTATGAAATGGGAAAGGCATTGGCTCCTCTTAAGGATGAAGGTGTTCTGATCATTGGTTCTGGGAGTGCTACCCATAACCTCAGAGCAATTGGACCTCGCAATAGCCCTCCTCCTCCCTGGGCAGTGGACTTCATGTCATGGTTAAAAAGCTCTCTTCTTCATGGAAGATATGAAGAAGTAAATCAATATGAAGAGAAGGCGCCATATGCAAAAATGGCTCATCCATGGCCGGATCACTTCTTCCCATTACATGTGGCAATGGGGGCAGCTGGGGAAAACGCGAAGGCCAAAGTTGTGCATGATAGTTGGGATGGTGGTTCTATTTCTTATGCTTCATTTGGTTTTACAGCAGACAATACTAGTTGA 1665 0.4721 MALKDTFYISHGSPTLSIDESLVARKFLQSWKKEVFPPRPTSILVISGHWDTAVPTVNVVDSTNDTIYDFYGFPKPMYQLKYPAPGAPHLAKRVKELLKEGGFSRVDEDKKRGLDHGAWVPLLLMYPEADIPVCQLSVQSNLDGTHHYNIGKALAPLKDEGVLIVGSGSAVHNLRALERHATVAAPWAVEFDNWLKEALLEGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAIGAAGENSKAKLIHSSIDLGSLSYASYQFTSDPRKEKETEIAKKTEENINNNSIMALKETFYISHGSPTLAIDDSIPAWKFLNSWKEEVFPHRPSSILIISGHWDTHVPTVNAVDRNDTIYDFYGFPKNMYKLKYPAPGAPHLAKRVKELLTASGFSRVDEDRKRGLDHGAWVPLMLMYPDADIPVCQLSVSSSMGGTYHYEMGKALAPLKDEGVLIIGSGSATHNLRAIGPRNSPPPPWAVDFMSWLKSSLLHGRYEEVNQYEEKAPYAKMAHPWPDHFFPLHVAMGAAGENAKAKVVHDSWDGGSISYASFGFTADNTS* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2510 554 PANTHER AROMATIC RING-OPENING DIOXYGENASE, CATALYTIC PROTEIN 288 551 - -
Lja2g2510 554 PANTHER UNCHARACTERIZED 1 264 - -
Lja2g2510 554 PANTHER AROMATIC RING-OPENING DIOXYGENASE, CATALYTIC PROTEIN 1 264 - -
Lja2g2510 554 SUPERFAMILY LigB-like 293 548 - -
Lja2g2510 554 CDD 45_DOPA_Dioxygenase 6 262 IPR014436 GO:0008270|GO:0016701
Lja2g2510 554 PANTHER UNCHARACTERIZED 288 551 - -
Lja2g2510 554 SUPERFAMILY LigB-like 6 262 - -
Lja2g2510 554 CDD 45_DOPA_Dioxygenase 293 548 IPR014436 GO:0008270|GO:0016701
Lja2g2510 554 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 262 IPR004183 GO:0006725|GO:0008198|GO:0016491
Lja2g2510 554 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 293 548 IPR004183 GO:0006725|GO:0008198|GO:0016491
Lja2g2510 554 Gene3D - 281 549 - -
Lja2g2510 554 Gene3D - 2 263 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2510 K15777 - gmx:100798236 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2510 2 32489018 32552416 Lja2g2510 2 32489018 32552416 ECH