Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2483 ATGGGGAACACGTTTTGCTTCTTCTGTGGTTGCATTGGTCAAGCCAGCGTCGGTGTGGTGGAGCACTGGGGTCGCTTCCACCGTGTAGCGCAACCCGGCTTCCACTTCTTCAACCCCCTCGCCGGCGAATGCCTCGCCGGCGTCCTCTCCACCCGCATCGCCTCCCTCGACGTCCGCATCGAAACCAAAACCAAGGATAACGTGTTTGTGCAGTTGCTATGTTCGATTCAATACAGGGTTGTTAAGGAGAACGCTGATGATGCTTTCTATGAGTTGCAGAATCCGCAGGAACAGATCCAGGCTTATGTTTTTGATGTGACTCGTGCTATTGTTCCAAGGATGAATTTGGATGACTTGTTTGAGCAGAAGGGTGAGGTTGCCAAAGCTGTGTTGGAGGAACTTCATAAGGTGATGGGAGAATATGGATATAGCATTGAGCACATACTGATGGTTGATATTATACCTGATCCTTCTGTGCGTAAGGCAATGAATGAAATTAATGCAGCTCAAAGGATGCTACTTGCTAGTGAATTCAAAGGAGATGCTGAAAAGGTGCTTCTAGTGAAGAAGGCAGAAGCTGAAGCTGAAGCCAAGTATTTGGGCGGGGTTGGTGTGGCCAGGCAGCGACAAGCTATCACAGATGGCCTGAGAGAGAACATCTTGAATTTTTCTGGCAAGGTAGAAGGCACTTCTGCTAAGGAAGTGATGGATCTTATCATGGTTACTCAGTACTTTGACACAATCAAAGACCTTGGGAACTCATCAAAGAATACCACAATTTTCATCCCCCATGGACCTGGCCACGTTAGGGATATTGGTGACCAGATACGCAATGGAGTGATGGAAGCAGCCAGTGCTCAAGTTATCGAGTGA 873 0.4811 MGNTFCFFCGCIGQASVGVVEHWGRFHRVAQPGFHFFNPLAGECLAGVLSTRIASLDVRIETKTKDNVFVQLLCSIQYRVVKENADDAFYELQNPQEQIQAYVFDVTRAIVPRMNLDDLFEQKGEVAKAVLEELHKVMGEYGYSIEHILMVDIIPDPSVRKAMNEINAAQRMLLASEFKGDAEKVLLVKKAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSGKVEGTSAKEVMDLIMVTQYFDTIKDLGNSSKNTTIFIPHGPGHVRDIGDQIRNGVMEAASAQVIE* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2483 290 Gene3D Band 7 domain 46 169 IPR036013 -
Lja2g2483 290 SUPERFAMILY Band 7/SPFH domain 48 171 IPR036013 -
Lja2g2483 290 Pfam SPFH domain / Band 7 family 12 187 IPR001107 -
Lja2g2483 290 CDD SPFH_like_u4 11 280 - -
Lja2g2483 290 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 1 288 - -
Lja2g2483 290 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 288 - -
Lja2g2483 290 SMART PHB_4 7 167 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2483 Lja-Chr2 31693807 31696695 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2483 - - gmx:100804986 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2483 2 31693807 31696695 Lja2g2483 2 31693807 31696695 ECH