Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2473 ATGTCTATATCTCAAAATGATCCTCTTTTGCAAGCTGAAACAACATGTAAATCACTTCTTCAAGAGCTTCAGATAATATGGGGTGAAGTTGGAGAGTCTGAGACTGAAAAAGATAGAATGTTGTTTGAGATTGATCAAGAGTGTCTAGATGTATACCGAAGAAAGGTAGATAAAGCTAATCGGTCTAGAGCTCAACTAAGGCAGGAAATCGCTGATTGTGAGGCAGAACTCGCAGCTATCTGTTTAGCTATGGCAGAGAGACCAGTACATATGAGGCAGTCTGATCAAAAGGCTGGAAGCTTGAAGGAGGAGCTAGCAAGAATTCACCCAGAACTGGAAGAAATGAGAAAAAGGAAACTTGAGCGTAGAAATCATTTTGTAGAAGTCCAGGAGCAGATTCAAAGTACTTCAAATGAGATTTATGGCCTGGTAGAATATATTCCAGCCATTGTAGATGAAACTGATTTATCTTTGAGAAAGCTTGAAGAATTGCACAGACAGCTTCATGCACTTCAAAAGGAGAAGAGTGATCGTCTCAAGAAGGTCCAAGAGCACCTGTACACTTTAAATTCTCTTTGTTCAGTGCTTGGCTTGAACTTCAAGCAGACAGCCAGTGGAGTCCATCCAAGTTTAGGAAATTCAGAAGGATCTAAAAGTGTAAATAATGACACCATCGGCAAATTGGTTGTTGCTATACAAGAGCTGCGGGAAGTAAAATTACAGAGAATGCAGAAGCTACAAGATCTAGCGACAACAATGCTGGAGCTCTGGAATCTGATGGATACACCCATTGAAGACCAACAGAGGTTTCAGAATGTTACTAGTAATATAGCTGCTTCAGAACATGAAGTAACTGAACCAAACACCTTGTCTGAGGACTTCATCAATTACGTTGAGGCAGAAGTATCTAGATTAGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTAGTCTTGAAGAAAAGAGCAGAGCTAGAGGAAATCTGTCGAAGAACTCGTTTAATTCCAGAAATTGATAGTGAAGTGGAAAATGCTGTAGAAGCTATAGAGTCTGGATCTGTAGATCCTGTTAGTGTGCTTGAGCGCATTGAACTTCAGATCGCCCAAGTCAAAGAGGAAGCTTTCAGCAGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGTCAGCATGTGATGAAGAGTCCTGGCTTGAGGAGTACAACAAGGATGAAAATCGTTACAATGCTGGGAGAGGTACTCATCTTACTCTCAAGCGAGCTGAGAAAGCCCGTGCACTGGTTAACAAAATTCCAGCAATGGTAGACAATTTGACTTCAAAAACTGTAGCATGGGAAAAGGATAGAGGTGCGGAGTTCATGTATGATGATATCCGTCTGCTCTGTATGCTTGAAGATTACACACTACTAAGACAAGAAAAGGAGCAAGAACGCCGTAGGCATAGGGACCTGAAGAAACTTCAGGGACAATTGATAGCCGAACAGGAAGTAATATATGGGTCAAAAAGTCCTTTGAAGAAGTCCCCGAGTGTAAAAAAGACACCTAGGACGCCAACTAGTAGTACCCCTCGAACGCCAACTGGAATTGCAGCTAGTAGAAGAGTCTCAACTCCAAGATCTGATTTGAAAAGTACCCTATCATGCACCCCAAAGAAGACTGACAAAGTGCACCAAATTCAGCCACTAAATTACCTAGATGATGATGGAGATTCATATATATCATCAGCTAGAAGAGGACTCAATATTGCTGATGTTACTGGTATTCCCATGAGAAAATGCTCATTTGGTGCTGGAAGTGTCCAGGATGTAGAATCTCCTTTGACACGACAACCTTTTTCTCCCGTCTGTTCGACAGTATCATCGAAATCGAATGTGGCTAATGCCGCAGGTGAGTCTAATATACAAAACAAGAAGTTGCTGAAAGCATTAGAATTTAACAATTTGCCATTCATTACTGCTACCTCAAAGACAGCCGCCACTACTGTTGTAGATGAAGAGAATATAACTCCTAAGGCAATGCCTCCAGCTCCTTCATCAGTTCCTTTTAGAGGTGACTTGGTTCAAGTTCAAGAGATTGAATACTCCTTTGAGGAAAGAAGGCTCGGTTATGTGTTAGCATGA 2115 0.4109 MSISQNDPLLQAETTCKSLLQELQIIWGEVGESETEKDRMLFEIDQECLDVYRRKVDKANRSRAQLRQEIADCEAELAAICLAMAERPVHMRQSDQKAGSLKEELARIHPELEEMRKRKLERRNHFVEVQEQIQSTSNEIYGLVEYIPAIVDETDLSLRKLEELHRQLHALQKEKSDRLKKVQEHLYTLNSLCSVLGLNFKQTASGVHPSLGNSEGSKSVNNDTIGKLVVAIQELREVKLQRMQKLQDLATTMLELWNLMDTPIEDQQRFQNVTSNIAASEHEVTEPNTLSEDFINYVEAEVSRLEELKSSKMKELVLKKRAELEEICRRTRLIPEIDSEVENAVEAIESGSVDPVSVLERIELQIAQVKEEAFSRKEILEKVEKWLSACDEESWLEEYNKDENRYNAGRGTHLTLKRAEKARALVNKIPAMVDNLTSKTVAWEKDRGAEFMYDDIRLLCMLEDYTLLRQEKEQERRRHRDLKKLQGQLIAEQEVIYGSKSPLKKSPSVKKTPRTPTSSTPRTPTGIAASRRVSTPRSDLKSTLSCTPKKTDKVHQIQPLNYLDDDGDSYISSARRGLNIADVTGIPMRKCSFGAGSVQDVESPLTRQPFSPVCSTVSSKSNVANAAGESNIQNKKLLKALEFNNLPFITATSKTAATTVVDEENITPKAMPPAPSSVPFRGDLVQVQEIEYSFEERRLGYVLA* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2473 704 Coils Coil 462 485 - -
Lja2g2473 704 MobiDBLite consensus disorder prediction 505 546 - -
Lja2g2473 704 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 516 - -
Lja2g2473 704 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 642 IPR007145 GO:0000226|GO:0008017
Lja2g2473 704 SUPERFAMILY Methyl-accepting chemotaxis protein (MCP) signaling domain 54 275 - -
Lja2g2473 704 MobiDBLite consensus disorder prediction 501 546 - -
Lja2g2473 704 Gene3D - 365 499 - -
Lja2g2473 704 Coils Coil 154 181 - -
Lja2g2473 704 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 642 - -
Lja2g2473 704 Coils Coil 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2473 Lja-Chr2 31267844 31273581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2473 11 538 EF-hand Containing Proteins AT5G62250 55.210 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2473 K16732 - gmx:100777734 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2473 2 31267844 31273581 Lja2g2473 2 31267844 31273581 ECH