Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2472 ATGAGAGACATGACTTGGGGGGCTGCACTCAAAGGTTCCCCCAAAGTTTATTCCCATTCAAGACCTATCTCTTGGATTGTGGTTTCAGTAGGAGTACTAGCAGTGTTCTTCTTGACTTTTGCTTGCTGGACTATGGTGTCATACCCTATTGGTTCAACCCTTCATGGATATTTCTATGGTTCAGAGAGTTCAGAAAATTCTTATATATCAGTTTCTCTGATCAATGAAACTTCTACCGATCTTACCGCGAATGTAAGTTTAGATCTTGCAGCTAGTAAAGCATCCCCTGATCTGCAACCTTCCAAAGTTTCCAATGGTGTGTCAAATGATAGCGAGATAGATCACACTCATACTGAATCAAGATCACAAGTACCCTACAGTGAAACTGCCTCACCAATTATTCCAGAATCCAAGGAGGTGGATGCCCTAGTAAATTCTGTTGTGGCGACTTCTAATTCGCAAGATCCTGTGACCTCATTTGGAAACAGCACAAATGTGATTAACAGTAGCTTGCCTGCTCACTCCGATTCACCAATTGATTTGGCTTCAGCTGCACCTACTCCAGTCGCTGGATCCAATTCTTCCAGTGTGACGGATAATAATGGAATGGAGGATCCAAATATAGTAGCTTCTATGAATAAGTCCAACACTCTATTTACAGCATCAAAAGACTGTGATCTGTACCATGGAAATTGGATCTATGATCCATTAGGACCATTATACACAAACAACTCATGCCCTGTGCTGACACAAACGCAGAACTGCTTGGGTAATGGGAGGCCTGATAAGGATTATGAGAACTGGCGATGGAAACCCCTTCAGTGTGACCTTCCACGATTTGATCCCAGCAAGTTTTTAGAGCTAATGAGAGGAAAGACATTGGCTTTCATTGGTGATTCAGTGGCTCGGAACCAGATGGAGTCAATGCTGTGTATTCTTTGGCAGGTAGAAGAACCCATGAATCAGGGAACTCGTAACATGCAGCGATATTATTTTAAGTCTGCATCTGTAACGGTTATACGGATATGGTCGTCATGGCTTGTCAAACACAATACTGAACCATTTAACTTTGCCTCATCTGGTGTGGAGAAGATCTATCTTGATGCCCCTGATGAGAGGTTGATGGAGTTGATCTCAACATTTGATGTGCTTGTTCTTTCTTCTGGCCATTGGTTTGCTAAGCAGTCTGTATATATTTTGAACAACGAGATTGTGGGAGGACAACTGTGGTGGCCGGACAAGTCTCGGCACATGAAGATCAACAATGTTGAAGCATTTGGTATTTCTGTGGAAACAGTTTTCACTGCTCTTGTTACACATCCAAATTATACAGGGCTCACAATTTTGCGCTCTTATTCCCCGGATCACTACGAGGGTGGGGCCTGGAACACAGGTGGATCATGCACTGGAAAAGTTAAGCCTCTTGCCCCCGGTGAGTTGGTGGAAAATAAGCATACCGATGCGATGCATGAGCAACAGGTAGCAGGTTTTAATCGAGCGATAAAAAAGACAACAAATAGATCAAAAATGAGACTGATGGATATTACTGAAGCCTTTCAGTACCGGGTTGATGGTCATCCTGGCCCATACAGGAGCCCTGACCCGAACAAGATTACAACACGCGGCCCAAATGGAAGGCCACCGCCACAGGATTGCTTGCATTGGTGCATGCCAGGCCCTGTAGATACCTGGAATCAAATTGTGTTTGAAATCATTAAGAGAGAATATGAAGGTGACAGGGCAGCATGA 1749 0.4385 MRDMTWGAALKGSPKVYSHSRPISWIVVSVGVLAVFFLTFACWTMVSYPIGSTLHGYFYGSESSENSYISVSLINETSTDLTANVSLDLAASKASPDLQPSKVSNGVSNDSEIDHTHTESRSQVPYSETASPIIPESKEVDALVNSVVATSNSQDPVTSFGNSTNVINSSLPAHSDSPIDLASAAPTPVAGSNSSSVTDNNGMEDPNIVASMNKSNTLFTASKDCDLYHGNWIYDPLGPLYTNNSCPVLTQTQNCLGNGRPDKDYENWRWKPLQCDLPRFDPSKFLELMRGKTLAFIGDSVARNQMESMLCILWQVEEPMNQGTRNMQRYYFKSASVTVIRIWSSWLVKHNTEPFNFASSGVEKIYLDAPDERLMELISTFDVLVLSSGHWFAKQSVYILNNEIVGGQLWWPDKSRHMKINNVEAFGISVETVFTALVTHPNYTGLTILRSYSPDHYEGGAWNTGGSCTGKVKPLAPGELVENKHTDAMHEQQVAGFNRAIKKTTNRSKMRLMDITEAFQYRVDGHPGPYRSPDPNKITTRGPNGRPPPQDCLHWCMPGPVDTWNQIVFEIIKREYEGDRAA* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2472 582 Pfam PMR5 N terminal Domain 223 276 IPR025846 -
Lja2g2472 582 MobiDBLite consensus disorder prediction 97 111 - -
Lja2g2472 582 MobiDBLite consensus disorder prediction 178 205 - -
Lja2g2472 582 PANTHER PROTEIN YLS7 11 579 - -
Lja2g2472 582 MobiDBLite consensus disorder prediction 523 547 - -
Lja2g2472 582 MobiDBLite consensus disorder prediction 187 205 - -
Lja2g2472 582 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 579 IPR029962 GO:0016413
Lja2g2472 582 MobiDBLite consensus disorder prediction 95 128 - -
Lja2g2472 582 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 277 570 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2472 Lja-Chr2 31261559 31264925 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2472 - - aprc:113872394 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2472 2 31261559 31264925 Lja2g2472 2 31261559 31264925 ECH