Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2465 ATGGCCTTCGAGACTTTACTCATCAGGGTGAAAACCGCGTTATCACACAGCTTCGACGCCGCCGCGCGACCCTCAAACTCGTCGCCGAAGCCGAAACGCGTCGCCGTTTTGGCCTTCGAGGTCGCCGGCGTGATGTCCAAGCTCCTCCACCTCTGGCAGTCCCTCTCCGACGCCAGCGTCGTCCGCCTCCGAAACGACGCCGTGTCACTCGAGGGAGTCTGGAAGCTCATCTCCGGCGACGAGTCGCTCCTCCTTAAACTCTCCGCCGCCGAGTTCGCCGTCTCGCTCCGGCACACCGCCGAGTCGGTCTCCCGCCTCAGCCGCAAGTGCCGCGACCCCGCTCTCCGATCGTTCCCCGGAGTCTTCGCCGAGTTCGCTGACTCGGGCCTCGACCCGCACGCGTGGACGATAACCACCCCCAGAGAGATCGAAGCCAAGCACAAGAGAATGGAGCGTTACGTGACGCTCACGGCAACGCTGCACAGAGAAATGGACGAGCTATCGCTCTTGGAAACCGCGTTGAGGAAAGCACTTCACCACAGCGGTTCCGACACTGAACCGTTCTCCGCCGTGAAGGATCACCAGAAAATTTCTGACCTCCAGCAGAAGATTTTCTGGCGGAAACAAGAGGTGAAGAGCCTCAAGGAACGATCGTTGTGGAGCAAAGGCTTTGATGGGGTTGTTCTGTTGCTTGCAAGATCATGTTTCACTCTGTTAGCGAGGATTAAGGTTGTGTTTGGAATCGGACACCGTGTACCTTGTTTGTCTCGAAGCTTATCAGCTTCTGCCACTGTTTATCCCTCTGATCATCATAATCATAACCCCACTTGTTCTTCTTCTTCTTCATTTGTATCTGGGCCGTTGGAATGTTCAAAGGTTGATGAGAAAAAAGAGGGTTTGGGAATTGGGTTTTTTGAGTCCAATTGCAAGGTTTTGAAGCCACCACTAGGTAGTTTAGGAGCTTCAGCTCTTGCTTTGCACTATGCTAATTTGATAATTGTGATGGAGAAGATGATTAAGTCACCCCAATTGGTTGGTGTGGATGCAAGGGATGATTTGTATGCTATGTTACCAAGCAGCATAAGGTTGTGTTTAAGGTCTAGATTGAAAGGGGTTGGATTCTCTGCTTGTGATCCTGTGCTTGCTGCAGAGTGGAAAGATGCTTTGGGGAGGATACTTGGGTGGTTGTCACCTTTGGCACATAACATGATTAGGTGGCAGAGTGAAAGGAGCTTTGAGAATCAGAGGTTGGTTGCCAAGACTAATGTGTTGCTGTTGCAGACTTTGTTCTTTGCAAACAAGGACAAGACAGAAGCTGCTATAACTGAGCTGCTTGTGGGGTTGAACTATGTTTGGAGGTTTGAGAGGGAAATGACTGCTAAGGCATTGTTTGAATGTACAAAGTTTAATGAGTTGTCAAGCTTGCAGAAACTCAGCTAA 1440 0.5104 MAFETLLIRVKTALSHSFDAAARPSNSSPKPKRVAVLAFEVAGVMSKLLHLWQSLSDASVVRLRNDAVSLEGVWKLISGDESLLLKLSAAEFAVSLRHTAESVSRLSRKCRDPALRSFPGVFAEFADSGLDPHAWTITTPREIEAKHKRMERYVTLTATLHREMDELSLLETALRKALHHSGSDTEPFSAVKDHQKISDLQQKIFWRKQEVKSLKERSLWSKGFDGVVLLLARSCFTLLARIKVVFGIGHRVPCLSRSLSASATVYPSDHHNHNPTCSSSSSFVSGPLECSKVDEKKEGLGIGFFESNCKVLKPPLGSLGASALALHYANLIIVMEKMIKSPQLVGVDARDDLYAMLPSSIRLCLRSRLKGVGFSACDPVLAAEWKDALGRILGWLSPLAHNMIRWQSERSFENQRLVAKTNVLLLQTLFFANKDKTEAAITELLVGLNYVWRFEREMTAKALFECTKFNELSSLQKLS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2465 479 Pfam Domain of unknown function (DUF3475) 36 91 IPR021864 GO:0045927
Lja2g2465 479 PANTHER BNAC09G50660D PROTEIN 1 478 - -
Lja2g2465 479 PANTHER DUF3475 DOMAIN PROTEIN 1 478 - -
Lja2g2465 479 Pfam Protein of unknown function (DUF668) 319 405 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2465 Lja-Chr2 31072793 31074831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2465 - - gmx:100801628 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2465 2 31072793 31074831 Lja2g2465 2 31072793 31074831 ECH