Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2459 ATGACCCAAACCCGAAAACCCTCCGACCCAAAACACCGTACCCGAGAACCCAAAACCCCTTCTTCTTCTTCTTCTTCTTCGTTCTCCACGAGCGGCATGAAACTCATCGTGCCCCTTCAAGGCGTGGTTCAAGGTCGTGGAGGCCTTTTTCTCGGTACTCTCATCCCTTGTGCACTCTTCTACTTCCTCCAGCTCTACCTCAAACGACGCCGTTCCGGCTTCAACAACCCTCCTTCTCCGTCTTCCACCTCTTCCCCTACCCTCCCTCGCACTTCCTCCCGCTCCAACTTGTCGACCCGTGGGTCAATTTCCCGGGTCCGGGTCTCCAAGCTCGCCACCCTCGTCGCCAAGCCTGATGACTCGCTGTATTATCTTGGCTTAGAAAAGGTCTCTCAGGATCCCTATGATGCGTCGGAGAATCCCAATGGGATTATTCAGCTTGGCTTGTCTGACAACAAGCTGTGTTTGGATTTGATTGGGAAATGGGTGTCCCGGAATTTGGAGGGGTCGTTGATGGGTAGTAGTGATGATGTTACTTTGAGCATTAATGGGATTGCACCTTATCAGCCACATGATGGATTGGGGGAATTGAAAATGGCCTTGTCGGATTTCATGCAGCAGGTGATGGGAGAATCAGTGAAATTCGACCCATCAAATATGATACTAACATCTGGAGCAACTCCTGCAATTGAAATTCTTTCCTTCTGCTTAGCAGACCATGGAAATGCATTCCTTGTCCCTACACCTTACTATCCAGGCTTTGACAGAGACGTGAGATGGCGCCCAGGCGTTGACTTAATACCTGTTCACTGTCGTAGTACTGACAACTTCAATCTAAATATCACTGCTCTTGAACAAGCATATAGTCAAGCAAGAAAACGAGGAGTCAAAGTTCGTGGGATCCTCATCTCCAACCCTTCGAATCCTGTTGGAAATATTCTGACACCAGACGTACTTTTCAGTCTTCTAGACTTCGCTGAAGAGAAAAACATTCATATCATTGCCGATGAAGTATTTGCAGGCTCGACATATGGAAGTGACAAGTTTGTGAGCATAGCTGAAATTCTCGATTCCGAATATGTAGACAAGAGCCGGGTTCATATAGTATATGGCCTGTCGAAAGACCTCTCACTTGCTGGCTTTAGAGTTGGGGTTATATATTCATTCAACCACACTGTTTTAGCTGCTGCCAAGAAGTTAAGTAGATTTTCCTCTATATCTGCGCCAACCCAAAGGTTAGTTGCTTCAATGCTTTCAGATAAAAGATTTATTCAGGAGTACCTTGAAACCAACCGGTACAGAATACAACAGGTACATGATAAATTTGTGGATTGTTTAAGTAAACTAGGAATCAAGTGTGCCAAGAGCAGTGCTGGCATGTTTTGTTGGGCTGATATGAGCGGATTAATCCGACCGTATAGTGAGAAAGGAGAACTTGAGTTGTGGGAGAAGTTTATGAGTGTTAGTAAGATCAATATAACTCCTGGATCAGCCTGCCATTGCATAGAACCAGGATGGTTTCGTATTTGTTTTACAAGTATATCTTTTGAGGACATTCCTCTAGTCATTGAACGGATTAGAAGAGTTGTTGAAAGTTGTAAATCTTCCAGTTGA 1614 0.4523 MTQTRKPSDPKHRTREPKTPSSSSSSSFSTSGMKLIVPLQGVVQGRGGLFLGTLIPCALFYFLQLYLKRRRSGFNNPPSPSSTSSPTLPRTSSRSNLSTRGSISRVRVSKLATLVAKPDDSLYYLGLEKVSQDPYDASENPNGIIQLGLSDNKLCLDLIGKWVSRNLEGSLMGSSDDVTLSINGIAPYQPHDGLGELKMALSDFMQQVMGESVKFDPSNMILTSGATPAIEILSFCLADHGNAFLVPTPYYPGFDRDVRWRPGVDLIPVHCRSTDNFNLNITALEQAYSQARKRGVKVRGILISNPSNPVGNILTPDVLFSLLDFAEEKNIHIIADEVFAGSTYGSDKFVSIAEILDSEYVDKSRVHIVYGLSKDLSLAGFRVGVIYSFNHTVLAAAKKLSRFSSISAPTQRLVASMLSDKRFIQEYLETNRYRIQQVHDKFVDCLSKLGIKCAKSSAGMFCWADMSGLIRPYSEKGELELWEKFMSVSKINITPGSACHCIEPGWFRICFTSISFEDIPLVIERIRRVVESCKSSS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2459 537 MobiDBLite consensus disorder prediction 1 30 - -
Lja2g2459 537 Gene3D Aspartate Aminotransferase, domain 1 133 525 IPR015422 GO:0003824
Lja2g2459 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 241 262 - -
Lja2g2459 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 147 173 - -
Lja2g2459 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 219 239 - -
Lja2g2459 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 331 354 - -
Lja2g2459 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 397 420 - -
Lja2g2459 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 295 319 - -
Lja2g2459 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 182 198 - -
Lja2g2459 537 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 365 389 - -
Lja2g2459 537 MobiDBLite consensus disorder prediction 74 101 - -
Lja2g2459 537 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 22 534 - -
Lja2g2459 537 SUPERFAMILY PLP-dependent transferases 117 531 IPR015424 -
Lja2g2459 537 MobiDBLite consensus disorder prediction 1 18 - -
Lja2g2459 537 CDD AAT_like 188 528 - -
Lja2g2459 537 Pfam Aminotransferase class I and II 146 526 IPR004839 GO:0009058|GO:0030170
Lja2g2459 537 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 371 384 IPR004838 GO:0003824|GO:0009058|GO:0030170
Lja2g2459 537 PANTHER AMINOTRANSFERASE ACS12-RELATED 22 534 - -
Lja2g2459 537 Gene3D - 167 420 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2459 Lja-Chr2 30965123 30968411 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2459 K14270 - gmx:100811906 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2459 2 30965123 30968411 Lja2g2459 2 30965123 30968411 ECH