Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2447 ATGATCAAGCAGGTTTTTCTTCTGTTCTGCTTTGTCTCTGGACTCACCCTTTCAGTCTCAGAGTCCAAATCTGCTTCTATGCTGCAACCTCATGTTGCTGAGGACTTTGATGTTGGCTATATTCAGATGAAGAGTGAGCATAACTGTTCTTATCTGGTGATGATTACAACAAGCTGTTCTTCACCCAAGTTTACTACTGATAAGATCAGTATTGCGTTTGGAGATGATCAAGGCAACCAGGTATATGCACCAAGACTGGATGATCCAATTTCAAAGACATTTGAGCAGTGCTCTTCAGATTCCTTTCAAATAGATGGTGCATGTGCATCCCCCATTTGCTATGTGTACCTATACAGATCTGGTTCAGAAAATGGTTGGAAGCCTGAAAGTGTGAAAATCTTTGGATTCGATGCAGAGCCTACTACTTTCAAATTCAACACCCCTATCCCCAATGATACATGGTACGGGTACAATTTGTGTGAAACACCTTCTCCTCCGTCTTCTTCACACCAACTTTCTGCTCAGAAATGGCTTATTTGTGTGGTTCTAGGATTTTTTCTTAGCTTTTTGATGTAA 576 0.4097 MIKQVFLLFCFVSGLTLSVSESKSASMLQPHVAEDFDVGYIQMKSEHNCSYLVMITTSCSSPKFTTDKISIAFGDDQGNQVYAPRLDDPISKTFEQCSSDSFQIDGACASPICYVYLYRSGSENGWKPESVKIFGFDAEPTTFKFNTPIPNDTWYGYNLCETPSPPSSSHQLSAQKWLICVVLGFFLSFLM* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2447 191 CDD PLAT 49 160 - -
Lja2g2447 191 PANTHER EMBRYO-SPECIFIC PROTEIN 2 190 - -
Lja2g2447 191 Gene3D PLAT/LH2 domain 43 178 - -
Lja2g2447 191 Pfam Embryo-specific protein 3, (ATS3) 42 160 IPR010417 -
Lja2g2447 191 PANTHER - 2 190 - -
Lja2g2447 191 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 47 157 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2447 Lja-Chr2 30573929 30576379 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2447 - - gmx:100499779 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2447 2 30573929 30576379 Lja2g2447 2 30573929 30576379 ECH