Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2422 ATGACCATAGAGGGCATAACAACCACAAAATCAATTCCTCAACCAGCAAAGAACCACAAAGAAGATGAAGGACCATTGGGTTTTGATGCCTCACTTCTCAGGCACCAACTAGACCTCCCAAAGCAGTTCATTTGGCCTGATTCAGAGAAGCCATGCATGACTGTCCCTGAACTTGTTGTTCCACTAATTGACTTGGGTGGCTTCCTCTTCGGCGACCCTATCGCAACGAAAGAAGCCGCGAGGCTCGTAGGAGAGGCGTGCGGAAAACACGGTTTCTTTCTTGTTGCGAATCATGGGATTGAAGCCGAGCTCATCTCTCATGCTCATAGCTATATGAATGATTTCTTCGAGATTCCCCTGTCTCAGAAACATAGAGCACAGAGGAAAGCAGGGGAACACTGTGGTTATGCTAGTAGCTTCACTGGCAGATTTTCCTCCAAGCTTCCATGGAAAGAAACACTTTCCTTCCAATTCTCAGCTGAGGAAAACTCACCCCCTATTGTCAAAGACTACCTTCATAACACATTGGGAGAAGAGTTTGAGCATTTCGGGAATGTTTATCAAGAGTACTGTGAAGCCATGAGCAATCTTTCTTTGGGGATAATGGAGCTTCTTGGATTGAGCCTTGGAGTTGAAAAATCCTGTTTTAGAGAGTTCTTTGAAGAGAACAGGTCAATAATGAGGCTCAATTACTACCCTCCTTGTCAAAAACCTGACCTTACTTTAGGCACTGGACCTCACTGTGATCCAACATCTCTAACCATTCTTCACCAGGACCAAGTTGGAGGCCTGCAAGTTTTTGTTGATAATCAGTGGCATTCCATTAGCCCAAATTTCAATGCCTTTGTTGTCAACATTGGTGACACCTTCATGGCTCTTTCAAATGGGAGATACAAGAGTTGTTTGCATAGGGCAGTGGTAAACAGCAAGACACCAAGAAAATCTCTTGCTTTCTTTTTGTGTCCAAAAGGTGATAAGGTGATTACTCCACCAAGTGAATTGGTGGATGATTTGACTCCAAGGACCTACCCAGATTTTACATGGCCTATGCTGCTTGAGTTCACTCAGAAACATTACAGAGCTGACATGAAAACACTTGAGGCATTCACCAACTGGCTTCAACAGAATAGGACCTGA 1137 0.4424 MTIEGITTTKSIPQPAKNHKEDEGPLGFDASLLRHQLDLPKQFIWPDSEKPCMTVPELVVPLIDLGGFLFGDPIATKEAARLVGEACGKHGFFLVANHGIEAELISHAHSYMNDFFEIPLSQKHRAQRKAGEHCGYASSFTGRFSSKLPWKETLSFQFSAEENSPPIVKDYLHNTLGEEFEHFGNVYQEYCEAMSNLSLGIMELLGLSLGVEKSCFREFFEENRSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDQVGGLQVFVDNQWHSISPNFNAFVVNIGDTFMALSNGRYKSCLHRAVVNSKTPRKSLAFFLCPKGDKVITPPSELVDDLTPRTYPDFTWPMLLEFTQKHYRADMKTLEAFTNWLQQNRT* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2422 378 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 21 375 - -
Lja2g2422 378 MobiDBLite consensus disorder prediction 1 25 - -
Lja2g2422 378 Pfam 2OG-Fe(II) oxygenase superfamily 225 322 IPR044861 -
Lja2g2422 378 Pfam non-haem dioxygenase in morphine synthesis N-terminal 60 166 IPR026992 -
Lja2g2422 378 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 223 322 IPR005123 -
Lja2g2422 378 SUPERFAMILY Clavaminate synthase-like 34 362 - -
Lja2g2422 378 Gene3D - 33 360 IPR027443 -
Lja2g2422 378 PRINTS Isopenicillin N synthase signature 83 100 - -
Lja2g2422 378 PRINTS Isopenicillin N synthase signature 247 268 - -
Lja2g2422 378 PRINTS Isopenicillin N synthase signature 282 308 - -
Lja2g2422 378 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 21 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2422 Lja-Chr2 30141686 30143848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2422 38 372 Glycosyltransferase AT5G59530 27.954 2.07e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2422 K05282 - gmx:100305378 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2422 2 30141686 30143848 Lja2g2422 2 30141686 30143848 ECH