Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2377 ATGGAGAAAAGAGAAACAAGAAGAAAGGATGTGGCACAAAAACTACTGCACATGAAAGGAGGCACTGGAGAAACAAGCTATGCCAAAAACTCCTTAGTTCAGCAAAAGGCGATTTCTTTGACAAAGGCAATGAGAGAGGAAGCCATAACCAACCTCTACAGCAAGAAATTCCCAAGAGTCTTATCAATTGCAGACATGGGTTGCTCTACTGGACCAAACACCTTCATGGTGATATCTGAAGTTATCAAATCGGTGGAGAATATTTGCCGAGAAATGAAGCATGAGTCTCCTGAATACCAGTTCTTCATGAATGATCTCCCTGATAATGATTTCAACAACATCTTTAAGTCCCTTGACAACTTCAAAAAGAAGCTAAGTGATGAAATGGAAGATGTTGAAATTGGTCCATGTTTTTTCTTTGGGGTTCCAGGCTCCTTTTATGGCAGGGTCTTCCCCACAAAAACTTTGCATTTCGTCCATTCCTCTTATAGCGTCCATTGGCTATCCCGGGTTCCTCAAGGTATAGAGAATAATAAGGGCAACATTTGCGAGGCTCGCACAAGCCCCTTGAAAGTCCGCAAGGCTTACTACAAGCAATTTCAGAAAGATTTCTCATTGTTTCTTAAGTCTCGTGCAGAAGAGCTCATTGAAGGAGGTCGTATGGTTTTAATACTTATGGGAAGAAGAGGTGAAGAGCAATATAACAAAGATGGTTGTTATATTTGGGAGCTTCTGGCTTTGGCTCTTAATGACATGGTCTCACAGGGAATAATAAATGAAGAGCAAATAGACACTTTCAACGTCCCTATGTACACCCCATCCCCATCTGAAGTGAGACTAGAGGTTCTCAAAGAAGGTTCATTCACCATCAATTGTGTGGAGGTGTCTGAAGTACATTGGAATGTTGCTCATGATCATGATGATGATGACTGGAATAACAATAATGCTAATTTCGATTCCAAATCTGAATCTCTTATAAAGTGCATGAGGGCTGTGGCGGAACCTTTGTTGATCACTCACTTCGGAGAAGTTGTTATTGAAGAGATTTTTCGTCGGTATCAAGCAATCCTTGCTGATCGAATGTCTAAGGAGAAAACTGAATTCGTCAATGTTAATATATCAATGACCAAAAAAGAATAA 1140 0.4035 MEKRETRRKDVAQKLLHMKGGTGETSYAKNSLVQQKAISLTKAMREEAITNLYSKKFPRVLSIADMGCSTGPNTFMVISEVIKSVENICREMKHESPEYQFFMNDLPDNDFNNIFKSLDNFKKKLSDEMEDVEIGPCFFFGVPGSFYGRVFPTKTLHFVHSSYSVHWLSRVPQGIENNKGNICEARTSPLKVRKAYYKQFQKDFSLFLKSRAEELIEGGRMVLILMGRRGEEQYNKDGCYIWELLALALNDMVSQGIINEEQIDTFNVPMYTPSPSEVRLEVLKEGSFTINCVEVSEVHWNVAHDHDDDDWNNNNANFDSKSESLIKCMRAVAEPLLITHFGEVVIEEIFRRYQAILADRMSKEKTEFVNVNISMTKKE* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2377 379 Pfam SAM dependent carboxyl methyltransferase 47 377 IPR005299 GO:0008168
Lja2g2377 379 Gene3D Vaccinia Virus protein VP39 30 366 IPR029063 -
Lja2g2377 379 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 16 373 IPR005299 GO:0008168
Lja2g2377 379 Gene3D - 16 364 IPR042086 -
Lja2g2377 379 PANTHER OS05G0102000 PROTEIN 16 373 - -
Lja2g2377 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 378 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2377 Lja-Chr2 28820067 28824509 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2377 K21483 - gmx:100815647 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2377 2 28820067 28824509 Lja2g2377 2 28820067 28824509 ECH