Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2356 ATGAAGATCACATTTCTTGCATTGGTCCTTCTCCTTGCTTTGAGCACAAAGACACTGCTTGGTTCAGCTGGTCCGACACCTAAGGAAGTGTTTGACTCATCAGGGAAGAACCTCCGAGCTGGTACCCAATACTACATCATTCCAGCTTCTCCTGATGCTGACGGTCTTAGCCTTGCCAATACAGGAAAAGATTGCCCTCTTGACGCGGTAGCTGTGGAAGGCTACCGAGGCCTGCCTTTGGTGTTCACGCCTGTGAACCCAAAGAAAGGCGTTGTTCGTGTCGACACTGATCTCAACATCTATTTTGCTGCTGAAACAAGCTGTCCTCAGTCAAATGTGTGGAAGGTATCTGACTATGATTCTGCAACAGGACAGTGGTTTGTGACTACTGGTGGTGTTTTCGGTGACCCGGGTTTGCAGACCATTAGAAATTGGTTCAAGATTGAGAGGTATGAGGATGCTTATAAACTGACTTACTGTCCAAGTGTGTGCACTAGTTGCACTCATCTATGCAGGGACATGGGAATATATGAGGATCAGTATGGAAAGCGTCTAGCTCTCACTGATGTGCCATATAAAGTTCGTAACACAAGAACAAAAGTATCTAACAAAAATACCCAACAAATGAAAATCACATTTCTTGCATTGGTCCTTCTCTTTGCCTTGAGCACAAAGGCATCACGGCTTGAAGCAGCTGGTCCAACACCTAAGGAAGTGTTTGACACATCAGGGAAGAAGCTCCGAGCCGGTGCCCAATACTACATCGTTCCAGCTTCTCCTGATGTTGGTGGCGGTCTTGGCCTTAACCGCACACGCAAAGCTTGCCCTCTTGACGCGGTAGCCGTGGATGGCAACCGTGGCCTGCCATTGGTGTTCACACCTGTGAACCCAAAGAAAGGTGTTGTTCGTGTTGACACCGATCTCAACATCTATTTTGCTACTGAAACAAGCTGTCCACAGTCCAATGTGTGGAAGGTTGATTACTTTGATTCTGCAACAGAGCAGTTGTTTGTGACTACTGGCGGTGTTTTAGGCGACCCGGGTTTGGAGACCATTAGAAATTGGTTCAAGATTGAGACGTACGAGGATGCTTATAAACTGAACTATTGTCCCAGTGTGTGCTATGGTTGCTATCACCAATGCTTGGACATAGGAATATATGAGGATCAGTATGGAAAGCGTCTAGTTGTTGATGATTTTCCATTCAAAATCACATTTTTTGCATGTGTCCTTCTCTTTGCCTTGATCTCACAACAACCGCTGCTTCAATCAGCTGAAGCTTTACCTGAACAAGTGGTTGACACATCCGGGAAGAAGCTTCGACCCGGCAGCAATTACTACATCATCCCGGCATCTTCTCGTATTGGAGGCCTTGGCCTTACTAGCACAAGCAAAGAATATTGCCCGCTCGATGTTGTGGCTGTGCGTGGTTTCCGAGGCCTACCTTTGGTGTTTAAACCTCTCGACACAAAGAAAGGTGTTGTTCGTGTCAATAGCGATCTCAATATCTATTTCGCTACAGAAACAAGTTGTCCACAATCCACAGTGTTGAGTGTGGACCACTATGATCCTCCAAGTCAGCTGTGGTTTGTAACCACCGGTGGTGTTTTGGGGAATCCGAGCTCGGATACCCTGTCCTATTGGTTCAAGATTGAGAAGTATGAGGAAGCTTATAAACTTGTTTTCTGCCCAAGTGTGTGCCCCAACTGCAGTTATCAATGCAGGGACATAGGGATACATGAGGATCAATATGGCAAGCGTCTTGCTCTCAATGATGTGCCGTACAAAATTCCCCTTGGCCACCAACCTTGCCTTATACCTCTCTATAGACCCATCAGCTTTAGAAATGGAACCAATAGAGTATTTGGTAAGGAAATAGAGGATGACAATGCAACAAGCAACTCTTCCTGA 1911 0.4615 MKITFLALVLLLALSTKTLLGSAGPTPKEVFDSSGKNLRAGTQYYIIPASPDADGLSLANTGKDCPLDAVAVEGYRGLPLVFTPVNPKKGVVRVDTDLNIYFAAETSCPQSNVWKVSDYDSATGQWFVTTGGVFGDPGLQTIRNWFKIERYEDAYKLTYCPSVCTSCTHLCRDMGIYEDQYGKRLALTDVPYKVRNTRTKVSNKNTQQMKITFLALVLLFALSTKASRLEAAGPTPKEVFDTSGKKLRAGAQYYIVPASPDVGGGLGLNRTRKACPLDAVAVDGNRGLPLVFTPVNPKKGVVRVDTDLNIYFATETSCPQSNVWKVDYFDSATEQLFVTTGGVLGDPGLETIRNWFKIETYEDAYKLNYCPSVCYGCYHQCLDIGIYEDQYGKRLVVDDFPFKITFFACVLLFALISQQPLLQSAEALPEQVVDTSGKKLRPGSNYYIIPASSRIGGLGLTSTSKEYCPLDVVAVRGFRGLPLVFKPLDTKKGVVRVNSDLNIYFATETSCPQSTVLSVDHYDPPSQLWFVTTGGVLGNPSSDTLSYWFKIEKYEEAYKLVFCPSVCPNCSYQCRDIGIHEDQYGKRLALNDVPYKIPLGHQPCLIPLYRPISFRNGTNRVFGKEIEDDNATSNSS* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2356 636 SUPERFAMILY STI-like 27 191 IPR011065 -
Lja2g2356 636 SMART kul_2 29 200 IPR002160 GO:0004866
Lja2g2356 636 SMART kul_2 238 410 IPR002160 GO:0004866
Lja2g2356 636 SMART kul_2 431 603 IPR002160 GO:0004866
Lja2g2356 636 CDD STI 238 407 IPR002160 GO:0004866
Lja2g2356 636 PANTHER LIPID TRANSFER PROTEIN 209 407 - -
Lja2g2356 636 PANTHER LIPID TRANSFER PROTEIN 1 196 - -
Lja2g2356 636 Gene3D - 234 408 - -
Lja2g2356 636 SUPERFAMILY STI-like 430 594 IPR011065 -
Lja2g2356 636 PANTHER KUNITZ TRYPSIN INHIBITOR 2 408 598 IPR002160 GO:0004866
Lja2g2356 636 Gene3D - 26 199 - -
Lja2g2356 636 Gene3D - 427 601 - -
Lja2g2356 636 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 548 567 IPR002160 GO:0004866
Lja2g2356 636 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 431 460 IPR002160 GO:0004866
Lja2g2356 636 SUPERFAMILY STI-like 236 407 IPR011065 -
Lja2g2356 636 PANTHER LIPID TRANSFER PROTEIN 408 598 - -
Lja2g2356 636 Pfam Trypsin and protease inhibitor 30 195 IPR002160 GO:0004866
Lja2g2356 636 Pfam Trypsin and protease inhibitor 239 406 IPR002160 GO:0004866
Lja2g2356 636 Pfam Trypsin and protease inhibitor 432 597 IPR002160 GO:0004866
Lja2g2356 636 CDD STI 431 592 IPR002160 GO:0004866
Lja2g2356 636 PANTHER KUNITZ TRYPSIN INHIBITOR 2 209 407 IPR002160 GO:0004866
Lja2g2356 636 CDD STI 29 195 IPR002160 GO:0004866
Lja2g2356 636 PANTHER KUNITZ TRYPSIN INHIBITOR 2 1 196 IPR002160 GO:0004866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2356 Lja-Chr2 28402031 28443701 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2356 - - lja:Lj0g3v0070519.1 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2356 2 28402031 28443701 Lja2g2356 2 28402031 28443701 ECH