Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2336 ATGATGGCGAGAAAGATGCATTGTGGCCTTCAAAAGATAGGTAATGATAGTTCAAAAGTTTCAGAAGCAGGAAAGGAAGTTTCAGAACCAGGAAAGGACGTATCAACGTCATATCAGCAACGAAATAAATCCACATCTTTGGAGATCACAAAAGATTGTGAAGAATCTTCTGTTTCAAGGATCCACTCTGATAGTAGGTGTGCCACAGCCATCCTTACAATCTATAATATTGGGCCTGATGGAAACTGGAGAGTTGTGGCCATTCCCGTGCAGTTTCTCAATCACGTTAACTTAGCTTCTGGCACAAACATGGATGGTGTGCAGCTTCTTTTCCCTCCACCTCTTAATAGGTTGAAGATTGATCAGTGTACGGGGCCCAAAGGACATCTTCCCCCCTATGCTTATCCGGTCAAGTCATTTACGAGAAGAACCGTCACTAGTTCAAATGCGCGTCGTGTATGTCAAAATAAGACTGCGAACAAAGCTTCTAAACAGAATGTACTCGCCGGGAGTTCTTGTAGACGGAGTTCATTAGACCGCAGCCCTAGCAGCTTCTCTGATAGTTCTGCTGCAGTAATTTCATCTGATAATTTCACAGGAAAAACCAAGGAAGACAAGTCTCTGAAGAAAAACTCAAGGAAAAGGTCAAGAAAGAAAGTTAAACAGAGCAAGAAGCAGACAGGTGACAGTGGCTCTCTTGAGCGAGAGGTTCTTACTGAAGAATATGTCAGTGTAAGTTTGACTTCTGAAGCCGGCAGCAGCTATGATGCTGATAAGGAGGTTGGTTCAATGTTGTATGCGACCACACCGGAATTATCATCTTCTGATGATAGACTAGTAAAATGTGATTGTGAAAGTAATGAGATGAATGGCAACATCAACGTTACAGAAGCATCAACAAGTTGCAACTCTTCTATTGATGAGACAACTATATCAAAAGCAACTGCACAGAACTCTGATGTAGAAACAAAGGACATTCAACATGTTGAGCTATGCTGTTTGAAAGATATACAAGATTCCCTGGTGCTGGATTCAGTTTCACTTGGTTCAGGAAGTGATGAAAGTACCAATGCAGGTGATATAGGAAAACAATCCAACAAGGCAAGTTGCAGAACCACTTCCATTTTTGGCGATGGGTATTTTCACAGTCGTAATGACCATGAACACAAAGAGAGAATCAGGCATGGTAGTCAAAATTGCATTGGCAATGATAAGAGGGTTAAGCAAAAGCAATCAATGTCGAAGAGTTCAAGTTTCAACAAATTTGGGGGTGTTGGAGTTTTGCATGGCCGAACGGGGAAGGAAAACAGCCACTCTGTCTGGCAAAAGGTTCAGAAGAACAGCTCTGATGAATGCGGTGGTGAATTGAAGAAAGTAAACACAACATTGTCACAATTTGTTTCCACTGCTGAAAAGGATTCTTCTGTTGTAAAAAATCGTAGCCCTGTCAGTGCAAATGTTGTCTCAGAACCAGAGGATAAAAAACACTTGAAAAATAAAGTTGGTGGGAGATCAAAAGGCAAAATGGATCCAGTTTCAAAAAAAGGTCACGGCAATTATTCTACGAAGGTTTCTCATTTTAACAGGGCTGTGTTAAATGATAATGTGAATGTTGGTGTTCAACAGAATGATACGTTGCATATCTCATCACAGGAAGCTAATCAACAAGGATTGAACAGTTTTTCTGGATTTAATTCTGAAATTAAATGCCTGACGAATAAGTTTCAGACCAATGGAGTAGAACATGAAACATCTGAAGGAGTTCACAGTGCACAATTTCATCTGAAGGAGTCATATATACAAACAAGAGCCTGCCACAATATTGCAAACTCAGAGAATGAAGGTATAGACATTCAAAATACCTCATTGGTAATGCAACATCCAGTGCCTTGTAATCTTTTTGTTGAAGTTGGTCAAACAGTGAAAGAAGTTTCTTCCGGAGACTTCAATGTACAAAACCACAGTTATGGAGCTACCCTGTGGAAATGGATACCAAAAAAGGGTACAGGGTTGGCAAAATCTGAATCTAACAGTTCATCACCAGAATGTTCTGATGAACCACCTAGTAAAAATTTTAACCTGGAAAGCAGTATTGAACCAAAAATAGACTCCTTTTCTGAAGATCAGGAATCTTCACTAAATGCAAGCAGTAAGGGCAAGGGTCAGATTTACTGTGAAGTTTCTTGTATAAACGACCGTGAGAATCTTGAATCGGGTAATGGGGTTGCAGATTCATTGACAAAGCACATGGGCAAGCATGAAATAGCGCATCGCATGAATTATGAATGTGAGAATCAAGATATGTCGGAAAATGATTCCTATAGAATAGCCCGAGCTGTGAATGATGCCTGCAACGCACAACAAGCTTGTGAAGCTGTACACATGGCCACAGGTGGCCCGGTTGCAGAGTTTGAAATGCTACTTCATTGTTGTAGTCCTGTTATTTGTCAGTCTCCTAATTCACCCAGTTGTTTGACCTGCTCGCAGAACCATGGCGGTGTCTCACTGTGCAGACATGAGATGCCTGCCCTATCTTTGGGATACCTTTGGCAGTGGTATGAAGAACATGGGAGCTATGGGTTAGAGATAAGGGCTCAGGAGTATGAAAACTTAAAGAAGCTAGGTGGTGTTGGTCAGTTTCCATTTCGTGCCTACTTTTCCTCTTCTTTATCAGCAGTTCAGCTGTTCAAGAACCGTGAACATCAATGTGCAAGTAGCAGCGACGATCTTCCAAATTGTAAGGTCTCAGAGGCATGTCAAATGATTGACATTTCAGAACATTCAATATTCTCTGTTCCTCAGCCTCACGACCAGGATGCAAACATTCAAATACCAAAGAAGACAGCTTCTATGAACAGTGCATCTAATCCATCTATCAACTCAGCGTGTTCTGGTGATTTAGAACTTCTTTTTGAATATTTTGAAGATGAACCACCTCAACAAAGACGGCCTCTATATGAGAAGATACAGGAGCTGGTTAGGGGCGATGTCCCAATTCAGTCCAAAATTTATGGGGATCCAACTAATTTGAATTCAGTAAATCTGCGAGATCTCCACCCTAGATCTTGGTACTCAGTTGCATGGTATCCTATTTACCGTATACCGGAGGGCAACTTTCGTGCAGCTTTCTTGACTTATCATTCACTTGGACATTTAGTTCGTAGAAGTACAAATTCTGATTTACAAACTGTAGATTCTTGCATAGTATCTCCAGCTGTAGGCCTTCAAAGTTACAATGCCAAGGGTGAGTGCTGGTTCCAGCTGAGTCATTCTGCACTGGAAGCAGAAATGTTGGGCATGAACCCTTCTTTTATTCTGAAAGAGCGTTTGCGGACACTTGAGGAAACAGCATCTCTCATGGCAAGAGCTGTTGTCAACAAGGGGAACCAAATCTGTACAAACAACCATCCTGATTTTGAGTTTTTCATGTCTAGGCGACGATACTAA 3447 0.4131 MMARKMHCGLQKIGNDSSKVSEAGKEVSEPGKDVSTSYQQRNKSTSLEITKDCEESSVSRIHSDSRCATAILTIYNIGPDGNWRVVAIPVQFLNHVNLASGTNMDGVQLLFPPPLNRLKIDQCTGPKGHLPPYAYPVKSFTRRTVTSSNARRVCQNKTANKASKQNVLAGSSCRRSSLDRSPSSFSDSSAAVISSDNFTGKTKEDKSLKKNSRKRSRKKVKQSKKQTGDSGSLEREVLTEEYVSVSLTSEAGSSYDADKEVGSMLYATTPELSSSDDRLVKCDCESNEMNGNINVTEASTSCNSSIDETTISKATAQNSDVETKDIQHVELCCLKDIQDSLVLDSVSLGSGSDESTNAGDIGKQSNKASCRTTSIFGDGYFHSRNDHEHKERIRHGSQNCIGNDKRVKQKQSMSKSSSFNKFGGVGVLHGRTGKENSHSVWQKVQKNSSDECGGELKKVNTTLSQFVSTAEKDSSVVKNRSPVSANVVSEPEDKKHLKNKVGGRSKGKMDPVSKKGHGNYSTKVSHFNRAVLNDNVNVGVQQNDTLHISSQEANQQGLNSFSGFNSEIKCLTNKFQTNGVEHETSEGVHSAQFHLKESYIQTRACHNIANSENEGIDIQNTSLVMQHPVPCNLFVEVGQTVKEVSSGDFNVQNHSYGATLWKWIPKKGTGLAKSESNSSSPECSDEPPSKNFNLESSIEPKIDSFSEDQESSLNASSKGKGQIYCEVSCINDRENLESGNGVADSLTKHMGKHEIAHRMNYECENQDMSENDSYRIARAVNDACNAQQACEAVHMATGGPVAEFEMLLHCCSPVICQSPNSPSCLTCSQNHGGVSLCRHEMPALSLGYLWQWYEEHGSYGLEIRAQEYENLKKLGGVGQFPFRAYFSSSLSAVQLFKNREHQCASSSDDLPNCKVSEACQMIDISEHSIFSVPQPHDQDANIQIPKKTASMNSASNPSINSACSGDLELLFEYFEDEPPQQRRPLYEKIQELVRGDVPIQSKIYGDPTNLNSVNLRDLHPRSWYSVAWYPIYRIPEGNFRAAFLTYHSLGHLVRRSTNSDLQTVDSCIVSPAVGLQSYNAKGECWFQLSHSALEAEMLGMNPSFILKERLRTLEETASLMARAVVNKGNQICTNNHPDFEFFMSRRRY* 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2336 1148 MobiDBLite consensus disorder prediction 489 513 - -
Lja2g2336 1148 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 6 1147 - -
Lja2g2336 1148 MobiDBLite consensus disorder prediction 165 198 - -
Lja2g2336 1148 MobiDBLite consensus disorder prediction 468 520 - -
Lja2g2336 1148 MobiDBLite consensus disorder prediction 1 44 - -
Lja2g2336 1148 Pfam Protein of unknown function (DUF789) 802 1142 IPR008507 -
Lja2g2336 1148 MobiDBLite consensus disorder prediction 165 234 - -
Lja2g2336 1148 MobiDBLite consensus disorder prediction 468 486 - -
Lja2g2336 1148 MobiDBLite consensus disorder prediction 671 695 - -
Lja2g2336 1148 PANTHER DUF789 FAMILY PROTEIN 6 1147 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2336 - - lja:Lj0g3v0302009.1 2201.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2336 2 28045943 28055274 Lja2g2336 2 28045943 28055274 ECH