Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2335 ATGGCCCAAAACGGGAATCAAGACAGGGTAATGGTGGAAAACACTGATGATTATGATCATCACCACCATGACCACAATGACCATGACCATGCAAGTGGTGATGAACATGAAGAGAAGCTGAAAGGGAAGAAGAAAGAAGAAGAACCTTCTGTGGAGAGGGTGTTCCAGCACCTGCTTGTTCCTTCATGGAGGAACCAGCTGACAGTGAGAGCTTTTGTGGTCAGCTTTGCACTCAGCATACTGTTCAGTTTCATTGTCATGAAGCTCAACCTCACCACTGGAATCATTCCTTCACTCAATGTCTCTGCTGGACTTCTGGGATTTTTCTTTGTGAAGACTTGGACCAAGTTCTTGGAGAGGTCTGGGTGGTTGAAGCAGCCTTTTACTAGGCAGGAGAACACTGTCATCCAGACCTGTGTTGTTGCCTCCTCTGGCATAGCCTTTAGTGGAGGATTTGGGAGTTACCTCTTTGCAATGAGTGAGCATGTAGCCAAGCAATCCTCAGACACCAGTGATTTTAAGGACCCAAAATTAGGGTGGATCATTGCTTTTCTCTTTGTTGTTAGCTTTCTTGGCCTCTTCTCAGTTGTACCTCTAAGAAAGATTATGGTCATAAAATTCAAATTGACATATCCAAGTGGTACTGCAACTGCACATCTCATCAACAGCTTCCACACTCCTCAAGGAGCCAAACTAGCAAAGAAGCAGGTGAGAGTGTTGGGAAAATTCTTTGGATTGAGCTTCTTCTGGGGTTTCTTTCAATGGTTCTACACTGCTTCTGATTCTTGTGGATTTCAAGCCTTTCCCTCACTGGGGCTCAAAGCATTTGAAAACAGGTTTTATTTTGATTTTGCTGCACTCTATGTTGGAGTGGGAATGATTTGCCCATATATCATAAATATATCAGTGCTCCTTGGAGGAATTCTTTCTTGGGGAGTAATGTGGCCTCTCATAGAAAATCAAGAGGGTCACTGGTACGATAAGGGCCTCGGTGACGGTAGCCTTCATGGAATCCAAGGATATAGGGTATTTATAGCCATAGCCATGATCCTGGGTGACGGTTTATACAACTTCGTAAAGGTGCTAACTCATACCTTAATGGGTTTGTATTATCAAATCAAGGAGAAACAAAGGGAGAATGTTCTTCCGGTCGCTGATCACGATTCTCCCTCGAGTCAGCTAACTTACGATGACCAGCGCCGCCAGCAATTCTTTCTTAAAGATCAGATTCCCCCATGGTTTGCAGTTGGAGGCTATGTTGCTATTGCTGCTATCTCAACCGCCACTCTGCCACACCTTTTTCCCCAGCTAAAATGGTATTACATTCTAGTTATCTACCTAGTTGCTCCCACCTTAGCATTCTGCAATGCTTATGGTTGCGGGCTAACAGACTGGTCCCTAGCATCTACCTATGGAAAGCTCGCCATCTTCACAATCGGAGCGTGGGCCGGTGCATCACACGGTGGAGTTCTTGCTAGCCTAGCAGCCTGTGGAGTGATGATGAACATCGTTTCCACCGCCTCTGACCTCATGCAGGACTTCAAGACCGGCTACCTTACGCTGTCTTCACCGCGCTCCATGTTTGTGAGCCAAATACTTGGAACAGCTATGGGATGTGTGATTTCTCCTTGTGTCTTTTGGATTTTCTACAAGGCCTTTCCTGACCTTGGGACACATAAAAGTGAGTACCCTGCCCCATATGCGATTGTGTACCGCAACATGGCCATACTTGGGGTACAAGGCTTCAGTTCGCTACCGAAAAATTGCCTCATGCTCTGTTATATATTCTTTGGTGCCGCCATTGTGATAAACTTGATTAAAGATTTAATGGGCAAGAGAGGGAGGTTCATACCACTTCCAATGGCTATGGCAATTCCTTTCTACATAGGGCCTTACTTTGCCATTGACATGTGTGTTGGAAGTTTGATATTATATGTCTGGGAAAAGGTTGACAAGGCTAAGGCAGATGCATTTGGACCAGCTGTAGCTTCTGGTTTGATATGTGGGGATGGAATATGGACAATTCCTGCTTCAGTACTTGCTCTTGTTGGAGTTAAGCCACCAATTTGCATGAGGTTTTTCTCAAGGGCCACAAATCAAAGGGTTGATACATTCTTAGGGAATTAA 2127 0.4504 MAQNGNQDRVMVENTDDYDHHHHDHNDHDHASGDEHEEKLKGKKKEEEPSVERVFQHLLVPSWRNQLTVRAFVVSFALSILFSFIVMKLNLTTGIIPSLNVSAGLLGFFFVKTWTKFLERSGWLKQPFTRQENTVIQTCVVASSGIAFSGGFGSYLFAMSEHVAKQSSDTSDFKDPKLGWIIAFLFVVSFLGLFSVVPLRKIMVIKFKLTYPSGTATAHLINSFHTPQGAKLAKKQVRVLGKFFGLSFFWGFFQWFYTASDSCGFQAFPSLGLKAFENRFYFDFAALYVGVGMICPYIINISVLLGGILSWGVMWPLIENQEGHWYDKGLGDGSLHGIQGYRVFIAIAMILGDGLYNFVKVLTHTLMGLYYQIKEKQRENVLPVADHDSPSSQLTYDDQRRQQFFLKDQIPPWFAVGGYVAIAAISTATLPHLFPQLKWYYILVIYLVAPTLAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASHGGVLASLAACGVMMNIVSTASDLMQDFKTGYLTLSSPRSMFVSQILGTAMGCVISPCVFWIFYKAFPDLGTHKSEYPAPYAIVYRNMAILGVQGFSSLPKNCLMLCYIFFGAAIVINLIKDLMGKRGRFIPLPMAMAIPFYIGPYFAIDMCVGSLILYVWEKVDKAKADAFGPAVASGLICGDGIWTIPASVLALVGVKPPICMRFFSRATNQRVDTFLGN* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2335 708 MobiDBLite consensus disorder prediction 1 48 - -
Lja2g2335 708 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 31 707 IPR045035 GO:0035673
Lja2g2335 708 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL8-RELATED 31 707 - -
Lja2g2335 708 Pfam OPT oligopeptide transporter protein 66 680 IPR004813 GO:0035673
Lja2g2335 708 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 65 681 IPR004813 GO:0035673
Lja2g2335 708 MobiDBLite consensus disorder prediction 12 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2335 Lja-Chr2 28029221 28034598 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2335 - - gmx:100814953 1206.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2335 2 28029221 28034598 Lja2g2335 2 28029221 28034598 ECH