Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2334 ATGGCTGGACTATGGTGGCTGATAGGAGAAGGGTCCCTAAGGAGAGCCCCTCTGAACCTCACATTCCATGACAGGGTAATGGATGATTATGATCATCACCACCATGACCATGACCATGCAAGTGGTGATGAATATGATGAACATGAGCACAAGCTGAAAGGGAAGAAAGAAGAAGAGCCTTCTGTGGAGAGGGTGTTCAAGCACCTGCTTGTTCCTTCATGGAGGAACCAGCTGACAGTGAGGGCCTTTGTGGTGAGCTTTGCACTCAGCATACTGTTCTGTTTCATTGTCATGAAGCTCAACCTCACCACTGGGATTATTCCTTCACTCAATGTCTCTGCTGGACTTCTGGGATTTTTCTTTGTGAAGACTTGGACTAAGTTCTTGGAGAGGTCTGGGTGGTTGAAGCAGCCTTTTACTAGGCAGGAGAACACTGTCATCCAGACCTGTGTTGTTGCCTCCTCTGGCATAGCCTATAGTGGAGGATTTGGGAGTTACCTCTTTGCAATGAGTGAGCATGTAGCCAAGCAATCCTCAGACACCAGTGATTTTAAGGACCCAAAATTAGGGTGGATCATTGCTTTTCTCTTTGTTGTTAGCTTTCTTGGCCTCTTCTCAGTTGTACCTCTAAGAAAGATTATGGTCATAAAATTCAAATTGACATATCCAAGTGGTACTGCAACTGCTCATCTCATCAACAGCTTCCACACTCCTCAAGGAGCCAAACTAGCAAAGAAGCAGGTGAGAGTGTTGGGAAAATTCTTTGGATTGAGCTTCTTCTGGGGTTTCTTTCAATGGTTCTACACTGCTTCTGATGGATGTGGATTCCAAGCCTTCCCCTCACTGGGGCTCAAAGCATTTGAAAACAAGTTTTATTTTAATTTTGCTGCAATCTATGTTGGAGTGGGAATGATTTGCCCATATATCATAAATATCTCAGTGCTCCTTGGAGGAATTCTTTCTTGGGGAGTAATGTGGCCTCTCATAGAAAACCAAGAGGGTCACTGGTACGATAAGGGCCTCGGTGACGGTAGCCTTCACGGAATCCAAGGATATAGGGTATTTATAGCCATAGCCATGATCCTGGGAGATGGTTTATACAACTTCGTAAAGGTGCTATCTCATACCTTAATGGGTTTGTATTATCAAATCAAGGAGAAACAAAGGGAGAATGTTCTTCCGGTCGCTGATCAGGACTCTCCCTCGAGTCAGCTAACTTACGATGACCAGCGCCGCCAGCAATTCTTTCTTAAAGATCAGATTCCACCATGGTTTGCAGTTGGAGGCTATGTTGCTATTGCTGCTATCTCAACCGCCACTCTGCCACACCTTTTTCCCCAGCTAAAATGGTATTACATACTAGTTATCTACCTAGTTGCTCCCACCTTAGCATTCTGCAATGCTTATGGTTGCGGGCTAACAGACTGGTCCCTAGCATCCACCTATGGAAAGCTCGCCATCTTCACAATCGGAGCGTGGGCCGGTGCATCACACGGTGGAGTTCTTGCTAGCCTTGCAGCCTGTGGCGTGATGATGAACATCGTTTCCACCGCCTCTGACCTGATGCAGGACTTCAAGACCGGCTACCTTACGCTGTCTTCACCGCGCTCCATGTTTGTGAGCCAAATACTTGGAACAGCTATGGGATGTGTGATTTCTCCTTGTGTCTTTTGGATTTTCTACAAGGCCTTTCCTGACCTTGGGACACATAAAAGTGAGTACCCTGCCCCATATGCGATTGTGTACCGCAACATGGCCATACTTGGGGTACAAGGCTTCAGTTCGCTACCGAAAAATTGCCTCATGCTATGTTATATATTCTTTGGTGCTGCCGTTGTGATAAACTTGATCAAAGATTTAATGGGCAAGAGAGGGAGGTTCATACCACTTCCAATGGCTATGGCAATTCCTTTTTACACAGGGCCTTACTTTGCCATTGACATGTGTGTTGGAAGTTTGATATTATATGTCTGGGAAAAGGTTGACAAGGCTAAGGCAGATGCATTTGGACCAGCTGTAGCTTCTGGTTTGATATGTGGGGATGGAATATGGACACTTCCTGCTTCAGTACTTGCTCTTGTTGGAGTTAAGCCACCAATTTGCATGAGGTTCTTCTCAAGGGCCACAAATCAAAGGGTTGATACATTCTTAGGGAATTAA 2160 0.456 MAGLWWLIGEGSLRRAPLNLTFHDRVMDDYDHHHHDHDHASGDEYDEHEHKLKGKKEEEPSVERVFKHLLVPSWRNQLTVRAFVVSFALSILFCFIVMKLNLTTGIIPSLNVSAGLLGFFFVKTWTKFLERSGWLKQPFTRQENTVIQTCVVASSGIAYSGGFGSYLFAMSEHVAKQSSDTSDFKDPKLGWIIAFLFVVSFLGLFSVVPLRKIMVIKFKLTYPSGTATAHLINSFHTPQGAKLAKKQVRVLGKFFGLSFFWGFFQWFYTASDGCGFQAFPSLGLKAFENKFYFNFAAIYVGVGMICPYIINISVLLGGILSWGVMWPLIENQEGHWYDKGLGDGSLHGIQGYRVFIAIAMILGDGLYNFVKVLSHTLMGLYYQIKEKQRENVLPVADQDSPSSQLTYDDQRRQQFFLKDQIPPWFAVGGYVAIAAISTATLPHLFPQLKWYYILVIYLVAPTLAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGASHGGVLASLAACGVMMNIVSTASDLMQDFKTGYLTLSSPRSMFVSQILGTAMGCVISPCVFWIFYKAFPDLGTHKSEYPAPYAIVYRNMAILGVQGFSSLPKNCLMLCYIFFGAAVVINLIKDLMGKRGRFIPLPMAMAIPFYTGPYFAIDMCVGSLILYVWEKVDKAKADAFGPAVASGLICGDGIWTLPASVLALVGVKPPICMRFFSRATNQRVDTFLGN* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2334 719 Pfam OPT oligopeptide transporter protein 77 691 IPR004813 GO:0035673
Lja2g2334 719 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL8-RELATED 44 718 - -
Lja2g2334 719 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 76 692 IPR004813 GO:0035673
Lja2g2334 719 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 44 718 IPR045035 GO:0035673
Lja2g2334 719 MobiDBLite consensus disorder prediction 34 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2334 Lja-Chr2 27978734 27983787 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2334 - - mtr:MTR_6g077870 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2334 2 27978734 27983787 Lja2g2334 2 27978734 27983787 ECH