Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2332 ATGGTCATAAAATTCAAATTGACATATCCAAGTGGTACAGCAACTGCCCATCTCATCAACAGCTTCCACACTCCTCAAGGAGCCAAACTAGCAAAGAAGCAGGTGAAAGTGTTGGGAAAATTCTTTGGATTGAGCTTCTTCTGGGGTTTCTTTCAATGGTTCTACACTGCTTCTGATGGATGTGGATTCCAAGCCTTCCCCTCACTGGGGCTCAAAGCATTTGAAAACAAGTTTTATTTTGATTTTGCTGCAATCTATGTTGGAGTGGGAATGATTTGCCCATATATCATAAATATCTCAGTGCTCCTTGGAGGAATTCTTTCTTGGGGAGTAATGTGGCCTCTCATAGAAAACCAAGAGGGTCACTGGTACGATAAGGGCCTCGGTGACGGTAGCCTTCACGGAATCCAAGGATATAGGGTATTTATAGCCATAGCCATGATCCTGGGAGATGGTTTATACAACTTCGTAAAGGTGCTATCTCATACCTTAATGGGTTTGTATTATCAAATCAAGGAGAAACAAAGGGAGAATGTTCTTCCGGTCGCTGATCAGGACTCTCCCTCGAGTCAGCTAACTTACGATGACCAGCGCCGCCAGCAATTCTTTCTTAAAGATCAGATTCCACCATGGTTTGCAGTTGGAGGCTATGTTGCTATTGCTGCCATCTCAACCGCCACTCTTCCACACCTCTTTCCCCACCTAAAATGGTATTACATTCTTGTTATCTACCTAGTTGCTCCCGCCTTAGCATTCTGCAATGCTTATGGTTGCGGGCTAACAGACTGGTCCCTAGTATCCACCTACGGGAAGCTCGCCATCTTTACAATCGGAGCGTGGGCCGGTGCATCACACGGTGGAGTTCTTGCTAGCCTAGCAGCCTGTGGAGTGATGATGAACATCGTTTCCACCGCCTCTGACCTGATGCAGGACTTCAAGACCGGCTACCTTACGCTGTCTTCACCGCGCTCCATGTTTGTGAGCCAAATACTTGGAACAGCTATGGGATGTGTGATTTCTCCTTGTGTCTTTTGGATTTTCTACAAGGCCTTTCCTGACCTTGGGACACATAAAAGTGAGTACCCTGCCCCAAATGCAATTGTGTTCCGCAACATGGCCATACTTGGGGTACAAGGCTTCGGTTCGCTACCCAAAAATTGCCTCATGCTATGTTATATCTTCTTTGGTGCTGCCGTTGTGATAAACTTGATCAAAGATTTAATGGGCAAGAGAGGGAGGTTCATACCACTTCCAATGGCTATGGCAATTCCTTTTTACACAGGGCCTTACTTTGCCATTGACATGTGTGTTGGAAGTTTGATATTATATGTCTGGGAAAAGGTTGACAAGGCTAAGGCAGATGCATTTGGACCAGCTGTAGCTTCTGGTTTGATATGTGGGGATGGAATATGGACACTTCCTGCTTCAGTACTTGCTCTTGTTGGAGTTAAGCCACCAATTTGCATGAGGTTCTTCTCAAGGGCCACAAATCAAAGGGTTGATACTTTTTTAGGGAATTAA 1521 0.4536 MVIKFKLTYPSGTATAHLINSFHTPQGAKLAKKQVKVLGKFFGLSFFWGFFQWFYTASDGCGFQAFPSLGLKAFENKFYFDFAAIYVGVGMICPYIINISVLLGGILSWGVMWPLIENQEGHWYDKGLGDGSLHGIQGYRVFIAIAMILGDGLYNFVKVLSHTLMGLYYQIKEKQRENVLPVADQDSPSSQLTYDDQRRQQFFLKDQIPPWFAVGGYVAIAAISTATLPHLFPHLKWYYILVIYLVAPALAFCNAYGCGLTDWSLVSTYGKLAIFTIGAWAGASHGGVLASLAACGVMMNIVSTASDLMQDFKTGYLTLSSPRSMFVSQILGTAMGCVISPCVFWIFYKAFPDLGTHKSEYPAPNAIVFRNMAILGVQGFGSLPKNCLMLCYIFFGAAVVINLIKDLMGKRGRFIPLPMAMAIPFYTGPYFAIDMCVGSLILYVWEKVDKAKADAFGPAVASGLICGDGIWTLPASVLALVGVKPPICMRFFSRATNQRVDTFLGN* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2332 506 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 1 505 IPR045035 GO:0035673
Lja2g2332 506 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL8-RELATED 1 505 - -
Lja2g2332 506 Pfam OPT oligopeptide transporter protein 1 478 IPR004813 GO:0035673
Lja2g2332 506 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 1 479 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2332 Lja-Chr2 27959715 27964702 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2332 - - gmx:100814953 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2332 2 27959715 27964702 Lja2g2332 2 27959715 27964702 ECH