Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2329 ATGGCACTTGCTAATGCTGCAGTGATTGGACCCTCTTTGTATGGCGTTGCTCGCATCGGTTACTATGAACCAAAGGTTCCGTTTCTGGGTTCCCACGGGGACGCGGGTTCTGGGTTTGGTGGTTCCTCTGCGTTTTGTGTTGGATCCCATGCGGGGAAGAGTGATGTTGTGCTTGAAAGGAGGAAGTTGAAGAACGTTGATAACAATGTACGCGTTGTTGAAAGTGCCCAGATGAAATTCACTGTTGAAATCCCTGTTTCTTGCTACCAGCTTATTGGTGTTCCTGATCGAGCTGAGAAAGATGAAATTGTTAAGGCAGTTATGGGTCTCAAAAATGCAGAAATTGAAGAAGGTTACACCATAAGTGTTGTTGCATCTCGCCAGGATCTTCTTATGGATGTTAGGGATAAACTTCTTTTTGAGCCGGAATATGCTGGGAACCTTAAAGAAAAGATTCCCCCTAAATCTTCCCTTCGTGTTCCTTGGTCTTGGTTGCCTGCTGCTTTATGCCTTCTTCAAGAGGTTGGAGAATCGAAGCTTGTGCTGGACATTGGACGGACAAGTCTTCAGCAGCAAGATGCCAAGCCATATACAGATGATTTAGTTCTTTCTATGGCGTTAGCTGAGTGTGCAGTTGCAAAGATTGGCTTTGAGAAGAACAAAGTATCTCAAGGTTTCGAAGCTCTTGCCCGTGCCCAGTGTCTTCTAAGAAGTAAACCATCTCTTGCAAAAATGACACTGCTTTCTCAGATTGAAGAATCTCTTGAAGAGCTTGCACCTGCTTGCACCTTGGAACTCCTGAGCATGTCAAATACCCCTGAAAATATTGATAGGAGACGTGGAGCAATTGCAGCTTTGCGAGAACTGCTTAGACAGGGTCTTGATGTCGAAGCTTCATGCCAAGTACAGGACTGGCCTTCCTTTCTAAGCCAAGCATTGGGCTGTTTGCTGGCTAATGAGATAGTTGATCTCCTTCCTTGGGATAGCTTAGCTGTGATGCGAAAGAATAAGAAGACAATCGAATCACAGAATCTAAGAGTAATAATTGATTCAAGTTGTTTCTATCGAGTTTTTACAGCTCATTTGGCACTTGGATTTTCCAGCAAGCATAAAGAATTGATTCACAAAGCAAAAAACATATGTGAATGTTTGATAGCTTCAGAGGGCTTTGATCTGAAATTTGAGGAAGCTTTCTGCTTATTCCTTCTTGGACTGGGCACAGAGGCTGAGGCGGTTGAAAAGCTGAAGCAGCTTGAGCTGAACTCAAATCCAAAACATAACTCTGTCTTGGGGAAGGCAATAATGGATGCTTCTGATGCTAACCCATCTTTGGAAATGTGGCTGAAGGATTCGGTGCTTGATTTGTATCCAGATACTAAAGGTTGTTCTCCAGCTCTGGCTAGTTTCTTTAATGCTCAAAAGAAAATTTCTGGAAGCAAGAACTCTAAAGGAGCTACACAAACATCTTCTACTATATGTCATAGACCTCTGTCCTCCTCTGGATCTGTAGAGCGAAGAGATTTTGAGGAACCTCGCTCATATATGAGCTCTTCTCCAAATCTAGGTTTTGCAGTTAAGCAGCTGGCTCCTACTGATTTGCAGAGTTCACTGTTATCTGGCAAAAATGAAAATGGACCCAATCTTAGCGAGTCACCTGTTAAAGTGAAAAGGAGCCTTGGCACTCATCACAATGGAGTCTGGGATAGTCACTTCACCGGTGCACACATATTTGAAAGAATAACACATTTTACTGTACTGGGTTGTATTGCATTTGCTACAATTAAGTTGTTGGGAATAAACATAAGCAAGAATTTTACTGGTTCTAATTGGGCTTTCACAAAAGCCAATCATAACATTGCTTGGACTGCAGATTCATCTTCTAACTACCCTGTAGGTCCATATATGAGACGGAGTACTATTTCCGACAAACTTGAGAGAATCCTGTCAAGGGTGAAGATACATTTCTTGCACCGGTCAGATGCTGGGTTTCGAAGTGATTTACACACTGCTCATAGCTCTTCATCCTTCTCTATTAAAGTGTACAGGAGGCAGATGCCTGTGGAAGAAGCAGAAACCCTTATTAGGCAATGGCAAGAAATCAAAGCTGAAGCTTTGGGGCCTAGCCATGAAGTTAATTCCCTTGCGGAAGTCCTTGATGAACCCATGCTTGCTCAGTGGCAAGCTTTGGCTGACGCTGCAAAAGAAAAATCTTGTCACTGGAGATTTCTTTTGCTGAAATTATCTGTCCTTAGAGCTGACATTCTATCAGATGGAAATGAAACTGACATGGCAGAAATTGAAGCTCTTTTAGAGGAAGCAGCTGAACTTGTGGATAGTTCTCAGCAAAAAAATCCAAACTACCTTAGCACTTATAAAGTTAGGTATGTTTTGAAGATGCAAGATGATGGATCATGGAAGTTCTGCGAAGGTGATATACGAACACCATGA 2448 0.4261 MALANAAVIGPSLYGVARIGYYEPKVPFLGSHGDAGSGFGGSSAFCVGSHAGKSDVVLERRKLKNVDNNVRVVESAQMKFTVEIPVSCYQLIGVPDRAEKDEIVKAVMGLKNAEIEEGYTISVVASRQDLLMDVRDKLLFEPEYAGNLKEKIPPKSSLRVPWSWLPAALCLLQEVGESKLVLDIGRTSLQQQDAKPYTDDLVLSMALAECAVAKIGFEKNKVSQGFEALARAQCLLRSKPSLAKMTLLSQIEESLEELAPACTLELLSMSNTPENIDRRRGAIAALRELLRQGLDVEASCQVQDWPSFLSQALGCLLANEIVDLLPWDSLAVMRKNKKTIESQNLRVIIDSSCFYRVFTAHLALGFSSKHKELIHKAKNICECLIASEGFDLKFEEAFCLFLLGLGTEAEAVEKLKQLELNSNPKHNSVLGKAIMDASDANPSLEMWLKDSVLDLYPDTKGCSPALASFFNAQKKISGSKNSKGATQTSSTICHRPLSSSGSVERRDFEEPRSYMSSSPNLGFAVKQLAPTDLQSSLLSGKNENGPNLSESPVKVKRSLGTHHNGVWDSHFTGAHIFERITHFTVLGCIAFATIKLLGINISKNFTGSNWAFTKANHNIAWTADSSSNYPVGPYMRRSTISDKLERILSRVKIHFLHRSDAGFRSDLHTAHSSSSFSIKVYRRQMPVEEAETLIRQWQEIKAEALGPSHEVNSLAEVLDEPMLAQWQALADAAKEKSCHWRFLLLKLSVLRADILSDGNETDMAEIEALLEEAAELVDSSQQKNPNYLSTYKVRYVLKMQDDGSWKFCEGDIRTP* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2329 815 Pfam ARC6-like, IMS domain 690 807 IPR025344 -
Lja2g2329 815 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 59 812 IPR044685 -
Lja2g2329 815 Coils Coil 763 783 - -
Lja2g2329 815 MobiDBLite consensus disorder prediction 477 516 - -
Lja2g2329 815 MobiDBLite consensus disorder prediction 477 498 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2329 - - lja:Lj2g3v0609710.1 1578.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2329 2 27916903 27922746 Lja2g2329 2 27916903 27922746 ECH