Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2327 ATGGTCGCCACCACCACCACCTCTGCAAAACCCGCTTCATCTCCAATGGATCTCCTTCACTCCCTCTCCCTCCCTCAATCCCTCAAGCTCAAAACCAAGCAACAAGAGCTTCTCCTCCGCGTCACCACTCTCACCCTCATCTACATCCTCGCCTTCATCACGCGCCTCTTCAGCGTCCTCCGCTACGAATCCATGATCCACGAATTCGACCCTTACTTCAACTACCGCACCACCCTCTACCTCACGCGCCACGGCTTCTCCGAGTTCTGGAACTGGTTCGACTCCGATTCATGGTACCCCCTCGGCCGCATCATCGGCGGCACGCTTTACCCTGGCCTCATGCTCACCGCCGCCGCTCTCTACAAAATCCTCCACTTCCTCCGCTTCGCTGTTCACATCCGCGAGGTCTGTGTCCTCACCGCGCCGTTCTTCGCCTCCAACACCGCCATCGTCGCGTACTTCTTCGGGAAGGAGATTTGGGACTCCGGTGCTGGGATCGTCGCCGCCGCGCTCATCGCGATCTGCCCTGGATACATCTCGCGCTCTGTTGCTGGGTCGTATGACAATGAAGGGGTGGCGATCTTTGCTCTGCTTCTCACGTTTTACCTGTTTGTGAAGGCGGTGAACACTGGGTCGCTGGCGTGGTCGCTGGCTTCGGCGTTTGGGTATTTCTACATGGTTTCGGCGTGGGGTGGTTACGTTTTTATCATCAATTTGGTGCCGCTTTATGTGTTGGTGTTGTTGGTTACTGGGAGATACTCGTTGAGGCTTTATGTTGCTTATAATTGTATGTATGTGTTGGGAATGTTGCTTGCCATGCAGATTAGGTTTGTGGGGTTCCAGCATGTTCAATCTGGGGAGCACATGGCTGCTATGGGAGTGTTTTTCCTGCTTCAGGTGTTTTTCTTCTTGGACTATGTAAGGCATTTGCTTGGTGATAAAAAGTTGTTCCAAGCATTTTTGAGGATCACCGTAACTGGTGCAGTCGGTGTTGGTGCCATTGCCTTGGGAGTGGGCACAGCAACTGGTTTTATTTCTCCATGGACTGGAAGGTTTTACTCCTTGCTTGATCCAACGTATGCTAAGGATCATATTCCAATTATTGCATCTGTCTCTGAGCATCAGCCTACTGCTTGGTCATCCTTCATGTTTGATTTCCATATCTTGTTGTTCCTTTTCCCTGCTGGGCTCTATTTTTGCTTCAAGCGCTTGACTGATGCCACAATCTTCATAGTTATGTATGGTCTTACAAGCATGTATTTTGCTGGTGTTATGGTTCGGTTAATTCTTGTCGCTACCCCTGCTGTATGCCTCATTAGTGCTATTGCGGTTTCTGCCACTGTGAAGAATTTGACTCAGGTGGTGAGGGCCAAAAGCCAGGCTGGTCAAAGTGGATCTAGTAAAGGAACTAGTACTACAAAAGGTTCTTCAAAGGGTGTAATTGATAATTCCCAGCCTTTCCAAAAGAACGGTGCTATGGCGTTACTTCTTGGTGCTTTTTATCTGCTCAGTAGATATGCTATTCACTGTACTTGGGTCACATCTGAGGCTTACTCATCTCCCTCAATTGTCTTGGCTGCAAGGGGTGCCCATGGCAACAGGGTCATCTTTGATGACTACCGTGAGGCTTACTTTTGGCTTCGACAGAATACACCACCAGATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAGAACAGTTATTGTTGACAATAACACTTGGAACAATACACACATAGCTACTGTTGGGCGTGCAATGTCATCTTATGAGGATGAGGCTTATGATATAATGAGATCGCTTGATGTTGACTATGTATTAGTCGTGTTTGGTGGTGTTACTGGTTATTCTTCTGATGATATTAATAAATTTCTATGGATGGTGAGAATTGGTGGTGGAGTTTTTCCTGTAATAAAAGAACCTGATTACCTTGTCAATGGGGAGTATCGTGTGGATAAAGGAGCAGCTCCCAAGATGTTGAACTGTCTCATGTACAAGCTGTCTTATTATCGGTTTGGGGAGCTGACAACAGAATATGGCAAACCACCCGGCTATGATCGTGCAAGAGGTGTTGAAATTGGAAATAAGGACATAAAGCTGGAGTACTTGGAAGAGGCGTTCACTACCCAAAATTGGATAGTTCGTATTTATAAAGTGAAACCACCTAAAAATCGGTGGTAA 2202 0.4759 MVATTTTSAKPASSPMDLLHSLSLPQSLKLKTKQQELLLRVTTLTLIYILAFITRLFSVLRYESMIHEFDPYFNYRTTLYLTRHGFSEFWNWFDSDSWYPLGRIIGGTLYPGLMLTAAALYKILHFLRFAVHIREVCVLTAPFFASNTAIVAYFFGKEIWDSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWSLASAFGYFYMVSAWGGYVFIINLVPLYVLVLLVTGRYSLRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDYVRHLLGDKKLFQAFLRITVTGAVGVGAIALGVGTATGFISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLTDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLTQVVRAKSQAGQSGSSKGTSTTKGSSKGVIDNSQPFQKNGAMALLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2327 733 Pfam Oligosaccharyl transferase STT3 subunit 41 519 IPR003674 GO:0004576|GO:0006486|GO:0016020
Lja2g2327 733 Gene3D - 536 686 - -
Lja2g2327 733 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 24 733 IPR003674 GO:0004576|GO:0006486|GO:0016020
Lja2g2327 733 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B 24 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2327 Lja-Chr2 27897300 27903247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2327 8 732 Miscellaneous Gene Families AT1G34130 85.655 0.0 1269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2327 K07151 - gmx:100780916 1312.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2327 2 27897300 27903247 Lja2g2327 2 27897300 27903247 ECH