Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2316 ATGGAGACAATCAGGCCAGCGTGGGCTGTCAAGGCTATCTTCGTGATCGTTTTCACTTCTGCTCTGTTCCGATGCGTCTGCGGCGTCAACATCACCGTCGGTGGAGCTTCCGGCTGGGATGTTCGATCCAACGTTCAGGCCTGGGCTTCCACCACCACATTCAATGTCGGCGATGATCTCGTGTTTTCATACACGCCGGTGAACGATGTGGTGGAGGTGAACCAACAAGGTTACGCCACGTGTACGATCGCAAACGCCATCGGCACGTACGACACCGGAGAGACGGTGATCCCCCTCACCGGACCCGGAACCCGCTACTTTGTCTGTGGCCGACTGGGCCATTGCCAGCAAGGGCTCAAAATCGAGGTCCCAGTTCAGGCCCAGCCCAATAACAACGCTACCAACGCTAACAATAACAACGGAACCAGTGCCGATCCAAACCGTCGCGGCGGAGGACGCTCTCCTCCTCGACGTTCTCCTCCGATGATCCGCCCTCCTCCGCGCCTTTCTCCTCCGCGCCGGTCTCCTCCTTCTCCCGGGGCTTTTCCACCTGCGCCCGGGCCTTGCAAGTGTTCCAGTGCTGAGGAGAGCCATCATGTGCTGTTGATGGTGCCATTGATTACCATCGTAATCACCCTCATACTCCTTTCTTCTCCGCCTATTCGCATCTAG 672 0.5774 METIRPAWAVKAIFVIVFTSALFRCVCGVNITVGGASGWDVRSNVQAWASTTTFNVGDDLVFSYTPVNDVVEVNQQGYATCTIANAIGTYDTGETVIPLTGPGTRYFVCGRLGHCQQGLKIEVPVQAQPNNNATNANNNNGTSADPNRRGGGRSPPRRSPPMIRPPPRLSPPRRSPPSPGAFPPAPGPCKCSSAEESHHVLLMVPLITIVITLILLSSPPIRI* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2316 223 MobiDBLite consensus disorder prediction 158 186 - -
Lja2g2316 223 Gene3D - 28 131 IPR008972 -
Lja2g2316 223 MobiDBLite consensus disorder prediction 129 147 - -
Lja2g2316 223 PANTHER BLUE COPPER PROTEIN 32 201 IPR039391 GO:0009055
Lja2g2316 223 MobiDBLite consensus disorder prediction 129 190 - -
Lja2g2316 223 PANTHER COPPER ION BINDING / ELECTRON CARRIER PROTEIN-RELATED 32 201 - -
Lja2g2316 223 SUPERFAMILY Cupredoxins 29 126 IPR008972 -
Lja2g2316 223 Pfam Plastocyanin-like domain 39 118 IPR003245 GO:0009055
Lja2g2316 223 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Lja2g2316 223 CDD Phytocyanin 29 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2316 Lja-Chr2 27746318 27747407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2316 13 125 Miscellaneous Gene Families AT2G32300 42.982 2.82e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2316 - - gmx:102664120 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2316 2 27746318 27747407 Lja2g2316 2 27746318 27747407 ECH