Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2202 ATGGAGAGTTCTGAGGAGGAGAACGATGGAGTCTCTGGGAGTCATATACCTAAGGAGCTGAGTCGTTTAGCTTCTACTGGTTTGAAGTTTGTAGATGAAGTACTTAATGGTCAAAATGAATTGTGTTTGGAGAACTTCCGCATGGATAAGGATGTATTCTATAAGTTATGTGATATTCTACAAGGCAAGGGCTTATTACGTCACACAAATCGAATCAAAATTGAGGAGCAGCTGGCCATATTTTTGTTCATTATTGGACATAATCTGCGGACAAGGGCTGTTCAAGAATTATTTCGTTATTCAGGAGAAACTATTAGTCGTCACTTTAACAATGTTTTGAATGCAATAATGTCAATTTCACTGGACTTATTTCAACCTCCTGGCTCTGATGTTCCTTCAGAAATCTTTAATGATCCTAGATTCTATCCATATTTTAAAGATTGTGTGGGAGCAGTTGGTGGTATCCATTTACCTGTGACAGTTGGTGTAGATGAGCAAGGACCTTTCCGCAATAAGAGTGGTGTGCTTTCACAGAATATTCTGGTAGCTTGCTCGTTTGACCTGAAGTTTCATTATGTTTTGGCTGGATGGGAAGGATCTGCTACAGATTTACAAGTTTTTAACTCAGCAATCACAAGGCGGAATAAATTGCAGGTCCCTGAAGGTAAATACTATCTTGTAGACAACAAGTATCCAAATGTGCGAGGTTTCATTGCTCCATATTCCAGCACTCCCTATCATTCAGCAGGATTTCCTAGCGGTTACCACCCACAGGATGCAAGTGAACTGTTCAATCAACGGCACTCACTACTACGAAATGTCACTGATCGAGTTTTTGGGGTTTTAAAGGCACGGTTTCCTATATTGATGGCTGCTCCTTCATACCCATTACAAACCCAGGTAAAGTTAGTGGTGGCAGCTTGTGCATTACACAACTTCATTCGCAGGGAGAATCCAGATGACAGGCTTTTCAAGATGTATGGAGAGGATGCATCATTTACAATGGAGGAATCACTACCCCCACTAGAGGCGGAACTACGGCCAAAAACGGATGTTGAGGCCCAGTGCCAGTCATTGGATCTTACTTTTGATGCTGAAGAAATTGCACTTGCTTCAGAGTCAAGGGACTTCATTGCAACTGGATTGTGGAATGATTTTATCCATGGTTTTGCTCCTATGTAA 1182 0.4137 MESSEEENDGVSGSHIPKELSRLASTGLKFVDEVLNGQNELCLENFRMDKDVFYKLCDILQGKGLLRHTNRIKIEEQLAIFLFIIGHNLRTRAVQELFRYSGETISRHFNNVLNAIMSISLDLFQPPGSDVPSEIFNDPRFYPYFKDCVGAVGGIHLPVTVGVDEQGPFRNKSGVLSQNILVACSFDLKFHYVLAGWEGSATDLQVFNSAITRRNKLQVPEGKYYLVDNKYPNVRGFIAPYSSTPYHSAGFPSGYHPQDASELFNQRHSLLRNVTDRVFGVLKARFPILMAAPSYPLQTQVKLVVAACALHNFIRRENPDDRLFKMYGEDASFTMEESLPPLEAELRPKTDVEAQCQSLDLTFDAEEIALASESRDFIATGLWNDFIHGFAPM* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2202 393 PANTHER UNCHARACTERIZED 1 393 IPR045249 -
Lja2g2202 393 PANTHER NUCLEASE HARBI1-LIKE PROTEIN 1 393 - -
Lja2g2202 393 Pfam DDE superfamily endonuclease 170 312 IPR027806 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2202 Lja-Chr2 25116238 25119868 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2202 - - gmx:100779133 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2202 2 25116238 25119868 Lja2g2202 2 25116238 25119868 ECH