Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2200 ATGGAGTCTCGGAAAGTCGTCGGTTTCGTTGGTTTGGATGAATTGGGATTGCAGATGGCGTCGTTGCTCGTTCGCCATGGCTACGCTGTTCAAGCTTTCGAGATAGGTGATCCCATCTTAGAAGAACTCGTGAAGCTTGGAGGAACTAGGTGCGCAAGCCCTTTGGAAGCAGGGAGAGGTGTAGCAGCTTTAGTTGTCCTAATATCTCATGTGGATCAAATTAATGATCTGATTTTTGGTGACGAGGGTGCTTTGAAAGGTCTAAAGCCAGATACAGTCCTTATTCTTCGTTCAACCATATCACCATCAGTTTTACAAAAACTGGAGAAGGATCTTGAAGAAATTCATGAGATAGCTTATGTCGTTGACGCTTATGTCTCTTATGGGAGGTCTGATGCTTTGGTTGGAAAAGTCACTATTGCATCATCTGGAAGATCAGATGCCATTGCAAGAGTACAGCCTATTCTTTCAGCTATGTGTGAAAAGCTTTTCACTTTTGAGGGTGAAGTTGGTGGCGGCAGCAAGGTTAAAATGGTTGCTGAGATGCTGGAAGGAATTCATTTCATTGCTTCAGTGGAGGCAGTCTCTCTTGGTGCAAAAGCTGGAATTCATCCATGGATAATCTATGATATAATTTCCAATGCTGCTGGAAATTCGTGGATATTCAAGAACAATATTCCTCTGTTGTTAAAGGGAGAGGTTAAACATCAAATTCTAAACAGTTTTGCTAAGGAGTTGGAAATCATTTTGGATATGGCCAAGTCACTAACTTTTCCACTTCCACTGTTGGCTGCTACTCATCAACAACTTATTCACGGGGTTTCACATGTTTGTTATAATGATGATGATGATCCAGCATTAATTAAGGTTTGGGAAAAGGTTTATGGGGTGAAAATTTCAGATGCTGCAACTGCAGATGCATATAACCCTGAACAACTGGCATCTGAATTCACTACTGATTCTAAGACTGTGAGACGCATTGGTTTTATTGGCCTTGGAGCTATGGGATTTGGCATGGCAACTCATTTGGTGAAATCAAATTTCTGTGTTGTTGGTTATGATGTGTATGAACCAACTCTAGTTCGATTTGCAAATGCTGGTGGCTTGGTTGGAAATTCTCCTGCAGAAGTGAGTAAAGATGTTGATGTTCTGATAATCATGGTTGCCAACGAAGCTCAAGCAGAGAACGCTTTATATGGAGAACATGGTGCAGTTTCAGTTCTTCCTCCTGGAGCATCAATTGTTCTTTCTTCTACTGTTTCTCCAGCATATGTGAGTCAGCTAGAGCGCAGATTGCATAATGAAGGAAAGAATTTAAAGTTTGTGGATGCCCCTGTTTCTGGAGGTGTTATGAGGGCCTCAATGGGAGATCTTACGATAATGGCTTCAGGAACTGATGATGCTCTTAAGAGTGCTGGTTTAGTGTTATCAGCCTTGAGCGAAAAGCTTTATGTTATCAAAGGTGGCTGTGGTTCTGGGAGTGGTGTAAAGATGGTTAACCAACTGCTTGCCGGAGTTCATATTGCATCAGCTGCTGAGGCAATGGCATTTGCAGCACGATTGGGTTTGAATACTAGACTGCTGTTTGATTTTATTACAGTTAGTGGTGGAACATCCTGGATGTTTGAAAATCGTGTCCCACACATGCTAAACAATGATTACACACCTTATTCAGCACTTGATATCTTTGTTAAGGACCTGGGAATTGTTACTCGTGAATCATCTTCTTTGAAAGTTCCACTGCACCTATCGACTATTGCTCACCAACTGTATCTGTCAGGTTCAGCTGCTGGTTGGGGACGGAAAGATGATGCTGGTGTGGTAAAGGTTTATGAGACACTAACTGGTGTTAGAGTTGAAGGAAAACTGCGGGCTCTTAAGAAAGATGTTGTGTTGCATTCTCTTCCACCTGAGTGGCCCCAAGATCACGTTCTTGATATACAAAGGGAAATAGAAAGCAATTCAAAAACTTTGGTTGTTCTAGATGATGATCCAACAGGAACACAAACTGTTCATGATATTGAAGTTTTAACTGAATGGACTATTGATTCACTGGTAGAGCAATTTAGAAAAAGTCCAAAATGCTTTTTCATTTTGACAAACTCCAGGTCACTGAGTTCTGAGAAGGCTAGTATATTGATAAAAGAGATTTGCAAAAATCTAGACAGTGCAGCAAAATCTGTTGACAGCATTGATTACACAGTAGTTTTGAGGGGAGATTCAACTTTGCGTGGTCATTTTCCAGAGGAACCAGATGCTGTCATTTCAGTATTGGGTGAAATGGATGCATGGATAATTTGTCCCTTTTTTCTTCAAGGAGGCCGTTACACTATTGAAGATATACATTTTGTTTCTGATTCTGATACGCTTGTTCCTGCTGGGGACACAGAGTTTGCCAAAGATGCTGCCTTTGGCTATAAATCTTCAAATCTACGTGATTGGGTAGAGGAGAAGACAAATGGCCGAATTCTTGCAAGTAGTGTTGTATCTATTTCAATCCACCTTTTGAGGAAAGGGGGGCCAGATGCAGTTTGTCAACATCTATGCAGTTTGCAGAAGGGATCAATATGTGTAGTTAACGCAGCTAGTGAAAGAGACATGGCTGTATTTGCACTTGGAATGATCAGGGCAGAATTGATGGGAAAACGTTTCTTGTGTCGCGCTGCTGCTAGTTTTGTTTCTGCCCGGATTGGAATCATCTCCAAGCCTCCAGTATTGCCAAAGGATATAGGAATAGTTAGAGAAAGAAATGGTGGTTTGATAGTTGTGGGATCATATGTTCCAAAAACAACAAAGCAGGTTGAAGAGCTTAAACTACAATGTGGTCAGTTCTTAAGAAGCATTGAGGTATCTGTTGAAAAAGTTGCAATGAGATCTATTGAGGAGCGGGAGGAGGAAATCAGTAGAACAGCTGAATTGGCAGATGTATATCTTAAAGCTCATAAAGACACTCTTATAGTGACTAGTCGAAATCTCATAACTGGAAAAACTGCCTCTGAGAGTTTGGATATTAACTTTAAAGTGAGTTCTGCGCTGGTGGAAATAATGAAAAGAATAACAACAAAACCTCGCTATATAATTGCAAAGGGTGGTATTACATCATCAGACCTTGCTACTAAAGCCCTTGGTGCAAGATGCGCCAAGATTGTCGGACAAGCACTTGCTGGTATTCCCTTGTGGCAATTAGGCCCTGAAAGTAGACATCCTGGAGTTCCTTACATTGTCTTCCCTGGTAATGTTGGCGACAGCAAAGCATTGGCAGAAGTGGTGAAGTCTTGGACTTGTCCTATCAGACTTTCATCAACAAAAGATATTCTTAAAAATGCAGAAAAGGGTGGATATGCTGTTGGAGCATTTAATGTCTATAATTTGGAAGGGGTTGAGGCTGTTGTTTCTGCTGCAGAGGAAGAGCAGAGTCCTGCCATACTACAGATCCATCCCGCCGCCTTGAAGCAAGGAGGAGTTCCCTTGGTTGCTTGTTGCATTTCTGCTGCAGAGCAAGCCAGTGTTCCCATTACTGTTCACTTTGATCATGGAACTTCAAAGCAAGATCTTGTGGAAGCTCTTGAGCTGGGATTCAGTTCGGTGATGGTCGATGGTTCAAATCTTTCTTTCAATGAAAATGCTGCATATACAAAGTTTATATCATTATTGGCTCACTCAAAAGATATGTTGGTAGAAGCCGAGCTAGGAAGATTGTCAGGGACAGAAGATGATTTGACAGTCGAAGAATATGAAGCCAAGCTAACAGATGTTAATATGGCACAAAAATTCATTGATGAAACTGGCATAGATGCTTTGGCAGTGTGTATCGGTAATGTGCATGGAAAGTACCCAGCAAGTGGTCCAAAACTCAGACTTGATTTGCTTAAGGAGCTGCATGATTTGAGCCAGAAGAAAGGAGTTTTTCTAGTGCTACATGGCGCATCAGGTTTGGGCGAAGAACTTGTTAAGGAATGCATAAATCTTGGTGTTAGAAAGTTCAATGTCAACACTGAAGTAAGGAAGGCATACATGGACTCCCTCATTACTCCCAAGAAAGATCTAGTTCAAGTTATGGCTTCTGCAAAGGAAGCCATGCAAGCTGTGGCTGCAGAAAAGATGCGTCTCTTTGGTTCATCCGGAAGGGCATGA 4134 0.4165 MESRKVVGFVGLDELGLQMASLLVRHGYAVQAFEIGDPILEELVKLGGTRCASPLEAGRGVAALVVLISHVDQINDLIFGDEGALKGLKPDTVLILRSTISPSVLQKLEKDLEEIHEIAYVVDAYVSYGRSDALVGKVTIASSGRSDAIARVQPILSAMCEKLFTFEGEVGGGSKVKMVAEMLEGIHFIASVEAVSLGAKAGIHPWIIYDIISNAAGNSWIFKNNIPLLLKGEVKHQILNSFAKELEIILDMAKSLTFPLPLLAATHQQLIHGVSHVCYNDDDDPALIKVWEKVYGVKISDAATADAYNPEQLASEFTTDSKTVRRIGFIGLGAMGFGMATHLVKSNFCVVGYDVYEPTLVRFANAGGLVGNSPAEVSKDVDVLIIMVANEAQAENALYGEHGAVSVLPPGASIVLSSTVSPAYVSQLERRLHNEGKNLKFVDAPVSGGVMRASMGDLTIMASGTDDALKSAGLVLSALSEKLYVIKGGCGSGSGVKMVNQLLAGVHIASAAEAMAFAARLGLNTRLLFDFITVSGGTSWMFENRVPHMLNNDYTPYSALDIFVKDLGIVTRESSSLKVPLHLSTIAHQLYLSGSAAGWGRKDDAGVVKVYETLTGVRVEGKLRALKKDVVLHSLPPEWPQDHVLDIQREIESNSKTLVVLDDDPTGTQTVHDIEVLTEWTIDSLVEQFRKSPKCFFILTNSRSLSSEKASILIKEICKNLDSAAKSVDSIDYTVVLRGDSTLRGHFPEEPDAVISVLGEMDAWIICPFFLQGGRYTIEDIHFVSDSDTLVPAGDTEFAKDAAFGYKSSNLRDWVEEKTNGRILASSVVSISIHLLRKGGPDAVCQHLCSLQKGSICVVNAASERDMAVFALGMIRAELMGKRFLCRAAASFVSARIGIISKPPVLPKDIGIVRERNGGLIVVGSYVPKTTKQVEELKLQCGQFLRSIEVSVEKVAMRSIEEREEEISRTAELADVYLKAHKDTLIVTSRNLITGKTASESLDINFKVSSALVEIMKRITTKPRYIIAKGGITSSDLATKALGARCAKIVGQALAGIPLWQLGPESRHPGVPYIVFPGNVGDSKALAEVVKSWTCPIRLSSTKDILKNAEKGGYAVGAFNVYNLEGVEAVVSAAEEEQSPAILQIHPAALKQGGVPLVACCISAAEQASVPITVHFDHGTSKQDLVEALELGFSSVMVDGSNLSFNENAAYTKFISLLAHSKDMLVEAELGRLSGTEDDLTVEEYEAKLTDVNMAQKFIDETGIDALAVCIGNVHGKYPASGPKLRLDLLKELHDLSQKKGVFLVLHGASGLGEELVKECINLGVRKFNVNTEVRKAYMDSLITPKKDLVQVMASAKEAMQAVAAEKMRLFGSSGRA* 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2200 1377 PANTHER ALDOLASE-RELATED 1 283 - -
Lja2g2200 1377 PANTHER ALDOLASE-RELATED 284 1297 - -
Lja2g2200 1377 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 7 164 IPR006115 GO:0050661
Lja2g2200 1377 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 326 484 IPR006115 GO:0050661
Lja2g2200 1377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 325 484 IPR036291 -
Lja2g2200 1377 Gene3D - 911 1092 IPR042213 -
Lja2g2200 1377 Gene3D - 657 895 IPR037051 -
Lja2g2200 1377 Gene3D Aldolase class I 1093 1377 IPR013785 -
Lja2g2200 1377 Pfam Sugar-binding N-terminal domain 658 895 IPR010737 -
Lja2g2200 1377 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 329 342 IPR002204 GO:0016491
Lja2g2200 1377 SUPERFAMILY Aldolase 1100 1377 - -
Lja2g2200 1377 TIGRFAM cbbA: ketose-bisphosphate aldolase 1099 1377 IPR000771 GO:0005975|GO:0008270|GO:0016832
Lja2g2200 1377 PANTHER KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN 284 1297 - -
Lja2g2200 1377 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 170 298 IPR008927 -
Lja2g2200 1377 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 491 611 IPR029154 GO:0051287
Lja2g2200 1377 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 290 IPR029154 GO:0051287
Lja2g2200 1377 PANTHER KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN 1 283 - -
Lja2g2200 1377 CDD TBP_aldolase_IIB 1102 1375 IPR000771 GO:0005975|GO:0008270|GO:0016832
Lja2g2200 1377 Pfam Fructose-bisphosphate aldolase class-II 1101 1376 IPR000771 GO:0005975|GO:0008270|GO:0016832
Lja2g2200 1377 Pfam Nucleotide-binding C-terminal domain 920 1086 IPR031475 -
Lja2g2200 1377 Gene3D - 320 487 - -
Lja2g2200 1377 Gene3D - 1 168 - -
Lja2g2200 1377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 163 IPR036291 -
Lja2g2200 1377 Gene3D - 169 300 IPR013328 GO:0016491
Lja2g2200 1377 Gene3D - 488 620 IPR013328 GO:0016491
Lja2g2200 1377 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 491 618 IPR008927 -
Lja2g2200 1377 SUPERFAMILY YgbK-like 658 1090 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2200 - - gmx:100779987 2317.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2200 2 25074769 25096733 Lja2g2200 2 25074769 25096733 ECH