Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2197 ATGACGGATCAGAACCAGAAAGCAGAGCTCTTTGAGCTCAACAATGGCGCCATGCAGGTCCTCATCACCAATCTCGGTTGCACAATCACCTCATTGTCCGTACCCGCCAAAGATGGGGTGTTGTCCGACGTTGTTCTCGGTCTCGACTCTGTTGAATCATACCAGAAAGGTCTTTCTCCTTATTTCGGCTGCATTGTGGGTCGGGTTGCGAACAGAATTAAGGATGGCAAGTTTACACTTGATGGGGTTGAGTATTCTCTGCCTATCAACAACCCACCAAACAGTCTCCATGGTGGAAACGTTGGGTTTGATAAGAAGATATGGGAGGTGATTGAATATAGAAAAGGTGAAACCCCATCAATCACTTTCAAGTATCAAAGTCACGATGGAGAGGAAGGTTATCCTGGGGAAATCACTGTAACCGCAACATACACGCTCACCTCAAACACAACTCTGAGGCTTGACATGGAAGGAGTGCCAAAGGACAAGCCCACCATAATTAACTTAGCTCAGCACACCTACTGGAACTTAGCCGGCCACAGCTCAGGGAATATACTTGACCATTCGATCCAAATTTGGGCCAATCACATCACTCCGGTGGATCAGAATACCGTGCCGACCGGTGAAATCATGCCGGTGAAGGGTACCCCTTTTGATTTCACATCTCAGAAGAGAATCGGTGACACAATTAGTCAGGTCGGAATGGGATATGACCACAACTATGTGCTTGATTCTGGGGAAGAGAAAGAAGGTTTGAGGCATGCTGCAAAAGTGAAGGAGCCATCGAGCTCGAGGGTGCTGAACTTGTGGACAAATGTCCCTGGTATGCAATTTTACACCGCAAACTATGTTGATGGTGTTGCTGGAAAAGCAGGTGCTGTGTATGGAAAGCATGCAGGGTTATGTCTTGAGACACAGGGATTCCCCAATGCCATAAACCAGCCAGATTTCCCATCTATTGTGGTTCGACCTGGTGAGAAGTATCAGCATTCCATGTCGTATGAGTTTTCAGTTGAGTGA 1020 0.4716 MTDQNQKAELFELNNGAMQVLITNLGCTITSLSVPAKDGVLSDVVLGLDSVESYQKGLSPYFGCIVGRVANRIKDGKFTLDGVEYSLPINNPPNSLHGGNVGFDKKIWEVIEYRKGETPSITFKYQSHDGEEGYPGEITVTATYTLTSNTTLRLDMEGVPKDKPTIINLAQHTYWNLAGHSSGNILDHSIQIWANHITPVDQNTVPTGEIMPVKGTPFDFTSQKRIGDTISQVGMGYDHNYVLDSGEEKEGLRHAAKVKEPSSSRVLNLWTNVPGMQFYTANYVDGVAGKAGAVYGKHAGLCLETQGFPNAINQPDFPSIVVRPGEKYQHSMSYEFSVE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2197 339 Gene3D - 1 339 IPR014718 GO:0030246
Lja2g2197 339 SUPERFAMILY Galactose mutarotase-like 2 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lja2g2197 339 CDD galactose_mutarotase_like 10 336 - -
Lja2g2197 339 Pfam Aldose 1-epimerase 10 334 IPR008183 GO:0005975|GO:0016853
Lja2g2197 339 PANTHER ALDOSE-1-EPIMERASE 7 338 - -
Lja2g2197 339 PANTHER ALDOSE 1-EPIMERASE 7 338 - -
Lja2g2197 339 PIRSF GALM 1 339 IPR015443 GO:0016853|GO:0019318
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2197 Lja-Chr2 25049621 25052086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2197 6 337 Miscellaneous Gene Families AT3G47800 50.301 3.42e-109 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2197 K01785 - gmx:100809972 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2197 2 25049621 25052086 Lja2g2197 2 25049621 25052086 ECH