Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2187 ATGAGAATCGCTTCCTCCGTTCTCCGCCGCACCCTCGCCGCCGCTAGCGGCGCCGGCTCCGCCTCATCCGTCGCCGTCCCCAACCGTTTCCTCCAGGCTGCTCTTTACAGCAGCGGCGCCGCCCGCACTCACCGCCGCTGGTTCTCCTACCTCATCGGCCCGGTCGCCGGCGCGTCACTCGGCGTCGCTGGAGCTTTGTACACTGCCGCCTCTTTCTCCCAGGAAGCTCTTGCCAAGGAACCTCCGCCGCCGGAAGCTCTCCCGAATGAGGTCGTTCTTTATCAGTACGAGGCTTGCCCTTTCTGTAATAAAGTCAAAGCATTTTTGGACTACTATGATATACCTTACAAAGTTGTCGAGGTCAACCCACTCAGCAAGAAAGAAATCAAATGGTCTGAGTATCAGAAGGTGCCAATATTAATGGTAGATGGCAAGCAGCTAAATGACTCATCAGCTATAATTGATGAACTGGGGCAGAAGATTCTGTCAAAGAAAAAGGCACATGCAACGTCTGAGGATGATGAAGAGACAAAATGGCGGCGGTGGGTTGATAATCATTTGGTACATGTTTTGTCACCTAACATATATCGAAATACTTCTGAAGCGCTTGAGTCCTTTGACTACATAACGAGCAATGGCAATTTTGGCTTTATGGAAAAAATTTCGGTGAAGTATGCTGGAGCTGCAGCCATGTATTTTGTCTCTAAGAAACTTAAGAAGAAATATAACATCACTGATGAACGTGCTGCTCTTTATGAGGCAGCAGAAACATGGGTAGATGCTCTGGATGGCCGGGAGTTCCTTGGAGGGTCTAAGCCTAACTTTGCTGACCTGGCTGTCTTTGGCGTTTTAAGACCCATACGCTATTTGAGGTCTGGGAAGGATATGGTGGAGCACACTCGTATTGGTGAGTGGTACACAAGAATGGAGGATGCCGTAGGAGAGCCTTCCAGGATTAAAGCCTAA 966 0.4979 MRIASSVLRRTLAAASGAGSASSVAVPNRFLQAALYSSGAARTHRRWFSYLIGPVAGASLGVAGALYTAASFSQEALAKEPPPPEALPNEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPLSKKEIKWSEYQKVPILMVDGKQLNDSSAIIDELGQKILSKKKAHATSEDDEETKWRRWVDNHLVHVLSPNIYRNTSEALESFDYITSNGNFGFMEKISVKYAGAAAMYFVSKKLKKKYNITDERAALYEAAETWVDALDGREFLGGSKPNFADLAVFGVLRPIRYLRSGKDMVEHTRIGEWYTRMEDAVGEPSRIKA* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2187 321 ProSitePatterns Glutaredoxin active site. 93 109 IPR011767 -
Lja2g2187 321 PANTHER PROSTAGLANDIN E SYNTHASE 2-RELATED 10 321 - -
Lja2g2187 321 CDD GST_C_mPGES2 172 315 IPR034335 -
Lja2g2187 321 Gene3D - 169 319 - -
Lja2g2187 321 Gene3D Glutaredoxin 85 164 - -
Lja2g2187 321 SFLD Glutathione Transferase (cytosolic) 49 320 IPR040079 -
Lja2g2187 321 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 10 321 - -
Lja2g2187 321 SUPERFAMILY GST C-terminal domain-like 162 316 IPR036282 -
Lja2g2187 321 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 89 165 IPR004045 -
Lja2g2187 321 SFLD Prostaglandin E synthase like.1 49 320 IPR034334 GO:0050220
Lja2g2187 321 Pfam Glutathione S-transferase, N-terminal domain 93 159 IPR004045 -
Lja2g2187 321 ProSiteProfiles Glutaredoxin domain profile. 79 178 - -
Lja2g2187 321 SUPERFAMILY Thioredoxin-like 90 164 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2187 Lja-Chr2 24879714 24884596 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2187 K05309 - gmx:100775694 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2187 2 24879714 24884596 Lja2g2187 2 24879714 24884596 ECH