Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2172 ATGTCACTGCAACTGAGACTACCATGCCTGATGATGACCCTTCTCCTCTGCATTCTCTTCCCTTCCTCTCTGAGCCTCCCTGATCCTGACTCAGCAACAACAACAACCCTGAAGCCAATTTTCACAACCCCATCTAAGCCAGCAACAACAATCCCTGCATTCCCAGAACAATCTGGTATAGCAGGGTGCCCTCTTGCTCTGTCAGATGAGCACTTTGATGGTATTAAGACTGCATGCGCCGCCACCAAACGTGGCTCCGACACGGCGGAGCTCCACCGCAGCAGGTGCTGCCCGGTGCTAGCAGCATGGGTTTACTCTGCTTACTCTGCCACTGCCTTAGGGAAGTTAAGCCATGGCTATGGCCATAGCCACACCACTTCATCATCTTCTGAGATGCCCCTGTTGCCAGATGACTCAGAAACCTGTGTGAATGGGTTGGAAAAGGCTTTGAAAGTGAGAGGGATTGAGCTGGCTAAACCCAATGAGACTTGTGATGCGGTGTACTGCTACTGTGGCATTAGGCTGCACCCTTTGAGCTGCCCTGATGCATTTTCTGTTGCCAAAAGTGGGGAGCTTGTTGGGGATGCTAGTGTGAGAAGGTTGGAGAAGAATTGCTTGAGTAGAAGCACCAATGTCAATGGCTTCCCTGGTCTTGGAGGGTGTACTAAATGCTTGAAGAGCCTCCATTTGCTTAACAAGAAGACTTCAAATTCAAGCAAAGCAGAAGACAGGACCACCAAGATCCACAACAAAGATTGTGAGCTCATGGGCTTGACATGGCTTCTGTCGAAGAATCGGACAGCTTATATTCACACAGTTTCTGGGGTTCTTCGCGCTTTGTTGATGAACACTGGTGGCTCTGACCCACGTTCCTGCACACTAAATAGTGATGGAATGCCTCTAGCTGTGGATTCATCTGAAATCTCTGGTCACTCTTTATCAACCAACCTCCAACCACCCATTTATCTTTGTTTGTTATTACTTAGTTTGCTATTATGTATGTACTTCACTGTGTTATTCTCCTAA 1026 0.4815 MSLQLRLPCLMMTLLLCILFPSSLSLPDPDSATTTTLKPIFTTPSKPATTIPAFPEQSGIAGCPLALSDEHFDGIKTACAATKRGSDTAELHRSRCCPVLAAWVYSAYSATALGKLSHGYGHSHTTSSSSEMPLLPDDSETCVNGLEKALKVRGIELAKPNETCDAVYCYCGIRLHPLSCPDAFSVAKSGELVGDASVRRLEKNCLSRSTNVNGFPGLGGCTKCLKSLHLLNKKTSNSSKAEDRTTKIHNKDCELMGLTWLLSKNRTAYIHTVSGVLRALLMNTGGSDPRSCTLNSDGMPLAVDSSEISGHSLSTNLQPPIYLCLLLLSLLLCMYFTVLFS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2172 341 PANTHER PROTEIN, PUTATIVE-RELATED 8 339 - -
Lja2g2172 341 Pfam SPARK 62 240 IPR043891 -
Lja2g2172 341 PANTHER GPI-ANCHORED PROTEIN 8 339 IPR040376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2172 Lja-Chr2 24625783 24628865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2172 - - gmx:100814208 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2172 2 24625783 24628865 Lja2g2172 2 24625783 24628865 ECH