Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2135 ATGATTCTTACTAACAACATTGCCACCGCATTCCCCTGTTCCCACCGGCCACAAACCGACCCGAACCGCCAAACCCGTTTTCACTTCCGGCGGCCGGTGAGGTCTGCGGCGTCCAACGGCGTGCATTGGGAGAGGAAGGGCGACAAGCACCGATCAATATGCACCGCCGATGAGCTTCACCGCGTATCTGTTTCCAACTCCGATTGGAAGCTTGCTCTGTGGCGCTACCTTCCTTCTCCCAAGGCCCCTTTGAGGAATCACCCGCTTTTGTTGTTGTCAGGGGTTGCAACCAATGCTATTGGTTATGATCTTTCCCCTGAGTCTTCATTTGCCCGGTACATGTCGGCGCAAGGATTTGATACGTGGACTCTTGAGCTTCGAGGAGCTGGGTTGAGCACAAAAGGAGACAGTTTAGTGGAAGATGAAGAGTGCCTCAAGAATTTGTATGGAATAGATTCTGCAATTAATGATGAGTTAGTAACTAAATCAGAAGAAGTACGGCCAACAACGAGGTTGATGGAGATTTTTACAAGGGCATCTGATAGGCTTGCAGGCTTTCTCCATGGAGATTTATCTAAAGGGAGACAAAATTCTGCAGTTGTTAGTCAAGTCAAGGATTTCAATCAGAGACTTCGAACTATTTTTGAAGGTCAAAAGTTTTTCCCAGCACCGATTTTAGAGTTGCAAGACCGTTTTACTGCCACTTTAGAAGAATTTCAGGAACAGCTTGAGCTGATTGTTAAGTATGATTGGGACTTTGACCATTATCTGGAAGAGGATATACCTGCTGCGATGGAGTACATAAGGGCTCAATGCCAACCAAGGGATGGAAAGTTGCTGGCAATTGGTCACTCAATGGGTGGTATCTTGTTGTATGCAAAGCTCTCACGTTCTTGTTTTGATGGAAAGGATTCTCAGTTGGCATCAGTTGTTACTTTAGGATCATCACTTGACTATACTCCTTCAAGATCATCTCTCAAGTTGCTTTTACCTCTGGCAGAACCTGCTCAGGCTTTAAACATTCCTGTTGTTCCACTTGGACCATTGATGGCTACTACTTATCCTCTTACGAACAGTGCTCCATTTGCTCTATCTTGGCTAATTTCTCAGATTTCAGCTCAAGACATGATGGATCAAAAGTTGCTTGAGAAGCTTGTTATGAACAACTTCTGTACTGTACCTTGTAAGCTTCTCTTGCAGTTAAAAACAGCCTTCTATAAAGGTGGTTTACGTGACAGGAGCGGAACATTCTTCTACAAGGACCATCTGCACAAAAGTAAAGTTCCTGTTTTAGCAGTTGCTGGTGACCAAGACTTAATTTGTCCTCCCGAAGCTGTATACGAAACGGTGAAGCTTATTCCTGAGGAACTGGTTACATACAAAGTCTTTGGGGAGTCTGGAGGTCCACACTATGCTCACTATGACTTAGTGGGTGGTCGTTTGGCAGCAGAACAACTGTATCCATGTATAACCGAATTTCTCATTCATCATGACATGGCCCCTGTATAA 1509 0.4493 MILTNNIATAFPCSHRPQTDPNRQTRFHFRRPVRSAASNGVHWERKGDKHRSICTADELHRVSVSNSDWKLALWRYLPSPKAPLRNHPLLLLSGVATNAIGYDLSPESSFARYMSAQGFDTWTLELRGAGLSTKGDSLVEDEECLKNLYGIDSAINDELVTKSEEVRPTTRLMEIFTRASDRLAGFLHGDLSKGRQNSAVVSQVKDFNQRLRTIFEGQKFFPAPILELQDRFTATLEEFQEQLELIVKYDWDFDHYLEEDIPAAMEYIRAQCQPRDGKLLAIGHSMGGILLYAKLSRSCFDGKDSQLASVVTLGSSLDYTPSRSSLKLLLPLAEPAQALNIPVVPLGPLMATTYPLTNSAPFALSWLISQISAQDMMDQKLLEKLVMNNFCTVPCKLLLQLKTAFYKGGLRDRSGTFFYKDHLHKSKVPVLAVAGDQDLICPPEAVYETVKLIPEELVTYKVFGESGGPHYAHYDLVGGRLAAEQLYPCITEFLIHHDMAPV* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2135 502 Gene3D alpha/beta hydrolase 57 159 IPR029058 -
Lja2g2135 502 Gene3D alpha/beta hydrolase 241 495 IPR029058 -
Lja2g2135 502 PIRSF UCP031088_abhydr 149 500 IPR016969 -
Lja2g2135 502 PIRSF UCP031088_abhydr 5 188 IPR016969 -
Lja2g2135 502 PANTHER LYSOSOMAL ACID LIPASE-RELATED 33 497 - -
Lja2g2135 502 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 33 497 - -
Lja2g2135 502 SUPERFAMILY alpha/beta-Hydrolases 61 494 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2135 Lja-Chr2 23977487 23982425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2135 - - gmx:100808317 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2135 2 23977487 23982425 Lja2g2135 2 23977487 23982425 ECH