Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2130 ATGAAAGGATCACACATTGCTTTGTTCACTTTGTTTGTGCTGCTTATGGCTGAAGTTGAAATGTCAATGGCAACAGTAACATGCAGCCCAGTACAACTGAGCTCATGTGTGAGTGCAATCACCTCGTCAACTCCTCCAACTAACCTTTGCTGCTCCAAGATCAAGGAACAGAAACCCTGCCTCTGCCAATACCTCAAGAATCCTTATCTCAGGAAGTTTGTCAGCTCTCCCAATGCCAGGAAAGTTGCTAACACTTGTGGCACTCCCTTCCCAAGGTGTTAA 282 0.4574 MKGSHIALFTLFVLLMAEVEMSMATVTCSPVQLSSCVSAITSSTPPTNLCCSKIKEQKPCLCQYLKNPYLRKFVSSPNARKVANTCGTPFPRC* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2130 93 Gene3D - 26 93 IPR036312 -
Lja2g2130 93 SMART aai_6 28 93 IPR016140 -
Lja2g2130 93 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 2 93 - -
Lja2g2130 93 CDD nsLTP2 28 93 IPR033872 GO:0006869
Lja2g2130 93 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 2 93 IPR033872 GO:0006869
Lja2g2130 93 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 93 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2130 Lja-Chr2 23878075 23878706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2130 1 93 Acyl Lipid Metabolism Gene Families AT3G18280 54.839 1.21e-34 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2130 - - gmx:113002176 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2130 2 23878075 23878706 Lja2g2130 2 23878075 23878706 ECH