Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2127 ATGACGGTCAGGACGCCTGGAACACCGGCTTCAAAGATAGACAGAACGCCAGCAACAACCCCAGGAGGGCCAAGAGCTAGGGAGGAGAAGATTGTGGTTACAGTAAGGTTAAGGCCTCTAAATAGGAAGGAGCAATTGGCTAAAGATCAGGTGGCATGGGATTGCGTCGATGATTATACTATAGTGTATAAACCGCCAGCACAAGAACGTGCTGTTCAACCAGCATCATTTACTTTTGACAAAGTTTTTGGTCCTGCTTGTGTAACTGAGTCTGTATATGAAGAAGGAGTGAAGAATGTCGCATTATCTGCGCTGATGGGCATTAATGCAACTGTTTTTGCTTATGGACAAACAAGCAGTGGAAAGACATATACAATGAGAGGAATAACAGAGAAGGCTGTCTATGATATCTATAAGCATATAATGAATACCCCTGAAAGAAATTTCACCATAAAAATATCTGGACTGGAAATTTACAATGAGAATGTTAAGGACTTGTTAAATTCAGAATCTGGTCGCAATTTGAAGCTTCTAGATGATCCTGAGAAAGGTACTGTGGTTGAGAAATTAGTGGAGGAAACAGCCCAAGATGACAGTCATTTGAGACATTTGATCTCCATTTGCGAAGCTCAAAGACAGGTGGGTGAAACTGCTCTAAATGATAACAGCTCGCGGTCTCACCAGATCATAAGACTGACAATTCAAAGTACACTTCGTGAAAATTCAGAATGTGTAAAATCTTTTGTTGCAACCCTGAACTTTGTTGATCTGGCTGGAAGTGAGAGGGTTGCACAAACACATACAGATGGCACTAGGCTCAAAGAAGGGTGCCATATTAACCTTAGCTTGATGACTCTTACAACTGTTATCAGGAAGCTCAGTGTTGGGAAAAAAAGTGGTCATATACCTTACAGAGATTCAAAGCTCACGCGTATATTGCAACACTCTCTTGGTGGGAATGCACGCACTGCCATTGTGTGTACTTTGAGTCCAGCACTAAGCCATGTAGAGCAATCTCGAAACACACTCTACTTTGCTACACGGGCAAAGGAAGTAACAAACAATGCTCAAGTTAACATGGTTGTATCGGAGAAGCAGCTTGTTAAACACTTGCAAAAGGAAGTAGCGAGGCTGGAGGCAGAGCTGCGCACTCCTGATCCATCTAAAGAAAAGGATTGGAAAATTCAACAGATGGAAATGGAAATTGAAGAGCTGAGACGCCAGAGAGATCTTGCACAAACTCAAGTGGACGAGTTACGCAGAAAGCTTCAGGAAGACCAGCAGATCTCAAAGCCACTTGAATCACCACATCTGCCAGTCAAGAAGTGCCTATCATTCACCGGTGCACTATCATCTATAAAACCCGAGCCAGGCTGTGAGAGAGTGAGAAACACAACTTTAAGACAGTCCATGAGGCAATCATCTACTGCTCCTTTTACCCTTATGCATGAAATTCGCAAACTTGAGCACCTCCAAGAGCAGCTGGGTGAAGAAGCTAATAGAGCTTTGGAAGTATTACAAAAGGAAGTGGCATGCCATAGACTAGGTAACCAAGATGCAGCTGAAACAATTGCAAAGCTGCAAGCAGAAATAAGAGAAATGCAATCTGTTAAGTCAGCACCCAAGCAAGTCGAAGTTGGAAACATGATTTCTGTCAACAAAAGTGTCAGTGCTAATCTCAAAGAAGAGATTACCCGGCTTCATTCACAGGGCAGCACCATTGCAAATCTTGAACAGCAGCTTGAAAATGTGCAAAGGTCCATAGACAAGTTGGTAATGTCTCTCCCGAACAATTTTCAGCAGTTAAGTGAAGCATCTCCTAAGCATAAAAAGGAACACAAAAGGAAAAAGTTGCTTCCTTTGTCTTCAAGCAGCGTTACAAATCGTCCAAATTTTATAAGATCTCCCTGCTCACCATTATCTAGTACTCATCAAGTTTTGGAATCTGATATTGAAAACAAAGCCCCTGAGAATGATGATACTGTTTCAACTGAGACTATGCAAGAGTCTGAGAAGGAGACTCCAACAAAGAGTGAAGAAGGTGGAGATGTTTCATCAAAGGAAAATACTCCAGGTTATCGACGCTCTAGTTCAGTCAACATGAAGAAAATGCAGAAGATGTTTCAGAATGCAGCAGAGGAGAATGTAAGAAGTATAAGAGCATATGTCACAGAATTGAAAGAACGTGTGGCGAAGCTGCAATACCAGAAGCAATTACTTGTTTGCCAGGTGCTTGAGCTTGAAGCAAATGAAGCAAGTGGCCATAATATAGAAAATGACGAGTACACGTGTGAACCAGAGGAGCCCCAGGTCTCATGGCAAATTTTATTCAGAGAGCAGCAGCAGCAGATCCTTGAATTATGGGATGTATGTCATGTGTCCATTATTCACAGGACACAGTTTTATTTGTTGTTCAAGGGAGATCAAGCTGATCAAATATACATGGAAGTCGAACTTAGGCGTTTGACATGGTTACAACAACACCTAGCAGAACTTGGGAATGCAAGCCCAGCTCCTCATGTTGGAGATGAACCTACTATCTCACTGTCATCAAGCTTGAGAGCCTTGAAAAGAGAAAGGGAATTTCTTGCTAAGAGAATGACTTCACGTTTTACACTAGAGGAGCGGGAGGAGTTATATTACAAATGGGATGTCCCTCTTGAAGGGAAGCAGAGGAAGTTGCAGTTTGTCAGCAAGCTCTGGACAGATCCTCATGATCAGAAACATGTACAGGAGAGTGCTGAAATAGTTGCTAAGCTTGTGGGTTTGAGCTCCACACGAGGTAACATGTCAAAGGAGATGTTTGAGCTGAACTTTGTGCTTCCATCTGATAAGAGGCCCTGGTTAATGGGCTGGAATCCCATCACAAACCTTCTCAATTTGTAA 2886 0.4248 MTVRTPGTPASKIDRTPATTPGGPRAREEKIVVTVRLRPLNRKEQLAKDQVAWDCVDDYTIVYKPPAQERAVQPASFTFDKVFGPACVTESVYEEGVKNVALSALMGINATVFAYGQTSSGKTYTMRGITEKAVYDIYKHIMNTPERNFTIKISGLEIYNENVKDLLNSESGRNLKLLDDPEKGTVVEKLVEETAQDDSHLRHLISICEAQRQVGETALNDNSSRSHQIIRLTIQSTLRENSECVKSFVATLNFVDLAGSERVAQTHTDGTRLKEGCHINLSLMTLTTVIRKLSVGKKSGHIPYRDSKLTRILQHSLGGNARTAIVCTLSPALSHVEQSRNTLYFATRAKEVTNNAQVNMVVSEKQLVKHLQKEVARLEAELRTPDPSKEKDWKIQQMEMEIEELRRQRDLAQTQVDELRRKLQEDQQISKPLESPHLPVKKCLSFTGALSSIKPEPGCERVRNTTLRQSMRQSSTAPFTLMHEIRKLEHLQEQLGEEANRALEVLQKEVACHRLGNQDAAETIAKLQAEIREMQSVKSAPKQVEVGNMISVNKSVSANLKEEITRLHSQGSTIANLEQQLENVQRSIDKLVMSLPNNFQQLSEASPKHKKEHKRKKLLPLSSSSVTNRPNFIRSPCSPLSSTHQVLESDIENKAPENDDTVSTETMQESEKETPTKSEEGGDVSSKENTPGYRRSSSVNMKKMQKMFQNAAEENVRSIRAYVTELKERVAKLQYQKQLLVCQVLELEANEASGHNIENDEYTCEPEEPQVSWQILFREQQQQILELWDVCHVSIIHRTQFYLLFKGDQADQIYMEVELRRLTWLQQHLAELGNASPAPHVGDEPTISLSSSLRALKREREFLAKRMTSRFTLEEREELYYKWDVPLEGKQRKLQFVSKLWTDPHDQKHVQESAEIVAKLVGLSSTRGNMSKEMFELNFVLPSDKRPWLMGWNPITNLLNL* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2127 961 MobiDBLite consensus disorder prediction 620 649 - -
Lja2g2127 961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 386 IPR027417 -
Lja2g2127 961 MobiDBLite consensus disorder prediction 1 15 - -
Lja2g2127 961 PANTHER KINESIN-LIKE PROTEIN KIN-7A 14 960 - -
Lja2g2127 961 Coils Coil 567 594 - -
Lja2g2127 961 Coils Coil 488 508 - -
Lja2g2127 961 Coils Coil 388 429 - -
Lja2g2127 961 Coils Coil 517 537 - -
Lja2g2127 961 MobiDBLite consensus disorder prediction 603 699 - -
Lja2g2127 961 Pfam Kinesin motor domain 36 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2127 961 Pfam Domain of unknown function (DUF3490) 777 941 IPR021881 -
Lja2g2127 961 ProSiteProfiles Kinesin motor domain profile. 30 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2127 961 Gene3D Kinesin motor domain 24 383 IPR036961 -
Lja2g2127 961 Coils Coil 361 381 - -
Lja2g2127 961 MobiDBLite consensus disorder prediction 650 684 - -
Lja2g2127 961 PRINTS Kinesin heavy chain signature 107 128 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2127 961 PRINTS Kinesin heavy chain signature 251 269 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2127 961 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2127 961 PRINTS Kinesin heavy chain signature 302 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2127 961 ProSitePatterns Kinesin motor domain signature. 250 261 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja2g2127 961 SMART kinesin_4 28 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2127 961 MobiDBLite consensus disorder prediction 1 27 - -
Lja2g2127 961 PANTHER CENTROMERE PROTEIN E 14 960 - -
Lja2g2127 961 CDD KISc_CENP_E 30 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2127 Lja-Chr2 23755383 23760344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2127 21 435 Miscellaneous Gene Families AT5G06670 39.858 2.23e-85 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2127 K11498 - gmx:100775206 1695.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2127 2 23755383 23760344 Lja2g2127 2 23755383 23760344 ECH