Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2112 ATGGCAATGAAGAACAAGGAGCAACAAGGAGCCAGGGTAGCTTCATATCTGAAATTTTTCAATGCTCAAGTATATCTACTCAATTTCTTTGCACATGTTTTGGTGTTTGGTTGTGGATTACTCATTGGTGTCACCCTCACTTTTTGCCTCAAAGATTTCTCCTTTAACTTCCAAATCCAACAATTCTCTTTCAAACCACCAAACCCTCCTCTGTCTCACTCTCCTCCAACAAAAATCTCATCCATCATCTCAATCTCAAATGGATTTAACCAAACAAAACCTTCTCCTTCTTCTTCTTCTTCTTCTCCGCCGACCGCGATCACGGATCAGACAAGGACAGTCACCAACCTCACCAGACAAGGGTTAATTGATTTCTTGAAGCCTCCCCTGGCTATGCATGCCATGAATGAGGAGGAATTGCTATGGAGAGCCTCTATGGATCCTTTGATTCATAAACCCCCATTCAAGCAGACTCCAAAGGTTGCATTTTTGTTCCTGACAAAGGGTCCTGTGCTGCTGGCTCCTCTGTGGGAGAGATTCTTCAAAGGAAATGAAGGGTTGTATTCAATCTATGTTCATCCTAATCCTTCTTTCAATGGAACAGTTCCTGAAAGCTCTGTTTTCCATGGCCGCAGAATCCCCAGCCAGGAGGTAGGATGGGGTGAAAACAGCATGATACAAGCAGAGAGGCGCCTCTTAGCCAACGCACTGCTCGACTTCTCCAATGAACGCTTTGTCCTCCTATCAGAATCCTGCATCCCTCTCTTCAACTTCTCCACCATCTACACCTACCTCATGAATTCCACCAAAACCTTCGTCGAGGCCTATGATCTCCCGGGCAACGTGGGGCGCGGAAGATACAACCCCAAAATGAAGCCCCTCATCAAACTCTCCCAGTGGCGAAAAGGCTCCCAGTGGTTCCAAATCGACCGCGCCCTCGCGCTCCAAGTAGTCTCCGACCGCCGTTATTTCCCCGTGTTCGAGAAGTACTGCAATCCTCAATGTTACAGTGATGAGCATTACTTGCCTACATTGGTCAACATTAAGTTTTGGAAGAGGAATTCTAATAGGACTCTGACTTGGGTTGATTGGACAAAGGGGGGACCTCATCCTTCCAAGTATATTAGGACTGATGTTACTGTTGAGTTTTTGGAGAGGTTGAGGCATGGAAATGGAACCACTTGCGAGTACAATGGAATGGTCACCAATATTTGTCACCTTTTTGCCAGGAAGTTCACTACTCATGCTTTGGAAAGATTGCTCAGATTTGCTCCTAAGCTAATGCAGTTCAATTGA 1296 0.4576 MAMKNKEQQGARVASYLKFFNAQVYLLNFFAHVLVFGCGLLIGVTLTFCLKDFSFNFQIQQFSFKPPNPPLSHSPPTKISSIISISNGFNQTKPSPSSSSSSPPTAITDQTRTVTNLTRQGLIDFLKPPLAMHAMNEEELLWRASMDPLIHKPPFKQTPKVAFLFLTKGPVLLAPLWERFFKGNEGLYSIYVHPNPSFNGTVPESSVFHGRRIPSQEVGWGENSMIQAERRLLANALLDFSNERFVLLSESCIPLFNFSTIYTYLMNSTKTFVEAYDLPGNVGRGRYNPKMKPLIKLSQWRKGSQWFQIDRALALQVVSDRRYFPVFEKYCNPQCYSDEHYLPTLVNIKFWKRNSNRTLTWVDWTKGGPHPSKYIRTDVTVEFLERLRHGNGTTCEYNGMVTNICHLFARKFTTHALERLLRFAPKLMQFN* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2112 431 Pfam Core-2/I-Branching enzyme 161 387 IPR003406 GO:0016020|GO:0016757
Lja2g2112 431 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 5 430 IPR044174 GO:0016757
Lja2g2112 431 PANTHER CORE-2/I-BRANCHING ENZYME 5 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2112 Lja-Chr2 23411308 23416369 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2112 - - gmx:100791882 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2112 2 23411308 23416369 Lja2g2112 2 23411308 23416369 ECH