Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2099 ATGAGTAGCAAGAAAAGGGTGATTTCCTTTGTGAGTAGTATTGAAGATGCTGCTGTGGACTTCTTCAATCATCTCTTGCAGGAGAAGCCTCAGATTTCATTCTTCATTCCACTGATTCTGATTGCTTGGGTTGTTGAGAGATGGGTCTTCCCTTTCTCCACTTGGGTTCCTATTGCACTTGCTGTGTGGACAACAATACAGTATGGGAGATATCAACGCAAGCTACTAGTGGAGGATTTGGATAAGAAATGGAAGCGAATCATACTGAATGTCTCGCCCATCACACCATTGGAGCACTGTGAGTGGCTTAATAAGTTGTTGACAGAAATCTGGTCCAACTATTTTAACCAGAAGCTCTCAAACAGGTTATCAGATATAGTTGAGAAACGTTTAAAGCTCCGGAAACCAAGATTTCTAGATAGAGTTGAGCTGCAGGGGTTTTCACTTGGATCATGCCCTCCAAGCTTGGCTTTGCAAGGGATGCGGTGGTCAACTATCGGTGATCAGCGAGTCATGCAACTGGGTTTTGATTGGGACACAAATGAAATGAGCATTTTGTTGCTTGCTAAGCTTGCGAAGCCATTGATTGGAACTGCTCGGATTGTGATCAACAGTCTTCATATCAAGGGTGATCTCCTTATTACACCGATTCTAGATGGAAAAGCACTCCTATATTCATTTGTATCAACACCTGAGGTGCGAGTAGGAATTGCCTTTGGAAGCGGTGGGAGCCAGTCACTTCCTGCCACTGAGTGGCCTGGTGTTTCTTCTTGGCTGGAAAAACTTTTTGCTGACACCTTGGTTAAAACCATGGTGGAACCTCGCCGTCGTTGTTTCACTTTGCCTGCAGTTGATTTAAGGAAAAAGGCTGTTGGAGGAGTTATATATATTAGAGTGATTTCAGCAAATAAACTTTCTAGGAGTTCCTTCAAAGCACTGAGATATTCAGAAGACAATTTTGATGACAAGGACCTACAGACATTTGTAGAAGTAGAAATTGAGGAATTAACCAGAAGAACAGATGTCAGACTTGGTTCAACCCCTAGATGGGACGCACCGTTTAATATGGTTTTGCATGATAATACAGGAACTCTTCGCTTCAATCTTTATGAGAGTCTTCCTAACAGTGTGAAGTGTGACTATCTAGCAAGCTGTGAAGTCAAGTTGAGGCATGTTGAAGACGATTCGACAATAATGTGGGCAGTTGGACCTGATTCTGGGGTCATAGCAAAGCAAGCTCTGTTTTGTGGAGATGAAATTGAAATGGTTGTCCCATTTGAGGGGGCCAACTCTGGAGAGTTGAAGGTGAGCGTCGTAGTAAAAGAATGGCAATTTTCTGATGGTTCACATACCATGAACAATCTCCGAGCTAGCTCTCAGCAGTCACTTAATGGATCATCAAATCTTCCATTAAGAACTGGACGGAAACTTTACGTAACTGTTGTGGAAGGCAAGGATCTTGCTGCAAAAGAAAAATCTGGAAAATTTGATCCATACTTTAAATTGCAGTATGGAAAGGTTGTCCAGAGGACAAAGACTTCTCATACTCCAAATCCTTCCTGGAATCAAATGTTTGAATTTGATGAGATTGGTGGCGGTGAATACTTAAAAGTTAAAGGCTTTAGTGAAGAAACTTTTGGAGATGAGAACATTGGCAGTGCACAAGTAAATTTGGAAGGGCTGGTTGATGGCTCGGCCAGGGACGTGTGGATCCCTCTTGAAAGAGTGCGTTCTGGAGAATTAAGACTTCAAGTAGAAGCAGTTAGGGTGGATGATCAAGAAGGATCAACGGGTTCAGGTAATGGTTGGATAGAACTTGTTTTGATTGAAGGAAGGGATCTTGTTGCCGCCGATCTCAGAGGCACGAGTGATCCATATGTGAGGGTACACTATGGAAACATAAAGAAAAAGACAAAGATTATACATAAAACACTTAACCCTCAATGGAACCAGACCCTTGAGTTCCCTGATGATGGAAGTCCCCTGGTACTTTATGTCAAGGACCACAACGCGTTACTACCGACATCAAGTATAGGGGAATGCGTTGTAGAATATCAAAGGTTGCCCCCGAACCAGATGGCTGACAAGTGGATACCTCTCCAGGGGGTGAAAAAGGGTGAGATTCACATCCAAATTACTAGAAAAGTTCCAGAGGTGCAGAAGAGGAAGAGTATAGACTCTGAACCTTCCTTGGGTAAATTACACCAAATTCCTAGCCAGATAAAAGAGATGATGATCAAGTTCAGGTCATTAATAGAGGATGAAAATCTTGAAGGACTTTCTACAACATTGAGTGAGCTAGAAACTCTAGAGGATACACAGGAAGGGTACATTGTCCAGTTGGAGACTGAACAAATGCTTCTTCTCAGCAAAATAAAGGAACTTGGCAAAGAGATCATTAATTCTTCTCCTTCTCAGAGCAGAAGATCTTCTGAAAGCCCTTAG 2445 0.4249 MSSKKRVISFVSSIEDAAVDFFNHLLQEKPQISFFIPLILIAWVVERWVFPFSTWVPIALAVWTTIQYGRYQRKLLVEDLDKKWKRIILNVSPITPLEHCEWLNKLLTEIWSNYFNQKLSNRLSDIVEKRLKLRKPRFLDRVELQGFSLGSCPPSLALQGMRWSTIGDQRVMQLGFDWDTNEMSILLLAKLAKPLIGTARIVINSLHIKGDLLITPILDGKALLYSFVSTPEVRVGIAFGSGGSQSLPATEWPGVSSWLEKLFADTLVKTMVEPRRRCFTLPAVDLRKKAVGGVIYIRVISANKLSRSSFKALRYSEDNFDDKDLQTFVEVEIEELTRRTDVRLGSTPRWDAPFNMVLHDNTGTLRFNLYESLPNSVKCDYLASCEVKLRHVEDDSTIMWAVGPDSGVIAKQALFCGDEIEMVVPFEGANSGELKVSVVVKEWQFSDGSHTMNNLRASSQQSLNGSSNLPLRTGRKLYVTVVEGKDLAAKEKSGKFDPYFKLQYGKVVQRTKTSHTPNPSWNQMFEFDEIGGGEYLKVKGFSEETFGDENIGSAQVNLEGLVDGSARDVWIPLERVRSGELRLQVEAVRVDDQEGSTGSGNGWIELVLIEGRDLVAADLRGTSDPYVRVHYGNIKKKTKIIHKTLNPQWNQTLEFPDDGSPLVLYVKDHNALLPTSSIGECVVEYQRLPPNQMADKWIPLQGVKKGEIHIQITRKVPEVQKRKSIDSEPSLGKLHQIPSQIKEMMIKFRSLIEDENLEGLSTTLSELETLEDTQEGYIVQLETEQMLLLSKIKELGKEIINSSPSQSRRSSESP* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2099 814 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 475 587 IPR035892 -
Lja2g2099 814 Gene3D C2 domain 292 418 IPR035892 -
Lja2g2099 814 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 600 713 IPR035892 -
Lja2g2099 814 ProSiteProfiles C2 domain profile. 455 571 IPR000008 -
Lja2g2099 814 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 293 398 IPR035892 -
Lja2g2099 814 CDD C2 604 700 - -
Lja2g2099 814 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 96 282 IPR031468 GO:0008289
Lja2g2099 814 PANTHER PLANT SYNAPTOTAGMIN 1 808 - -
Lja2g2099 814 SMART C2_3c 294 401 IPR000008 -
Lja2g2099 814 SMART C2_3c 476 570 IPR000008 -
Lja2g2099 814 SMART C2_3c 603 697 IPR000008 -
Lja2g2099 814 Pfam C2 domain 476 573 IPR000008 -
Lja2g2099 814 Pfam C2 domain 604 700 IPR000008 -
Lja2g2099 814 Pfam C2 domain 295 394 IPR000008 -
Lja2g2099 814 Gene3D C2 domain 591 715 IPR035892 -
Lja2g2099 814 Gene3D C2 domain 460 590 IPR035892 -
Lja2g2099 814 ProSiteProfiles C2 domain profile. 577 698 IPR000008 -
Lja2g2099 814 PANTHER OS01G0128800 PROTEIN 1 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2099 Lja-Chr2 23242373 23249605 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2099 603 712 Lipid Metabolism Gene Families AT3G57880 31.148 2.89e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2099 - - gmx:100807475 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2099 2 23242373 23249605 Lja2g2099 2 23242373 23249605 ECH