Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2089 ATGGCGAGGGTAAAGGGAACCTTGCTCCTCGTGCCGCAGCCTCCACATCGCCGTCTCCGCCGTCGTTTCACAGAGCATTGCCTTCTCCTCGATAGTGTACCTCGTGTCATGAAGCTTTCGGAGCGAATACGTAACCGGACTCGTACCTCGCCGCAGTTACCCAGCGGCGACATGGTGCGCCGCCGTAAACGCCAAAGTCTGCCGCCACCTGGGAATTCTAGCGGTCGCCATCATCGGTCAAAGCGGATGAGACATTCTGAGTCCGATCATTCGGGCTTAAACTGCGGAGTGTTTTCTAGGAGATGGGTTTTCTCTTCCAAAGATTGTTCTAATTGCATGGATAAGGTTGTAGTTGTTTCATACAATATACTTGGTGTTGAGAATGCATCTAGGCATCTGGATTTGTATTCTAACATTCCACGTAGTTTCTTAGCGTGGGACAGGCGGAAAAGTCTCATACTTGAAGAAATTAATCATTATAATGCAAGCATACTGTGTTTCCAGGAGGTTGATCATTTTAATGATTTGGATGGTCTTTTCCAGAACAATGGCTTTAAAGGTGTTTACAAGGCTCGCACAGGGGGAGCACGTGATGGTTGTGCTATATTTTGGAAAGACAAATTATTTAATCTTTTGCATCAAGAAGATATAGAGTTTCAGAGATTTGGCCTGCGTAACAATGTAGCTCAACTTTGTGTTTTTGAGGTAAACCGTGATAGACCAGAATCCGACACATGTGAATTAACAGCAGTGACGCCATCTTCCGGTAAAAAAAGATTTATAGTAGGAAATATACATGTGCTGTTCAACCCAAATCGTGGCGACATCAAACTGGGCCAGGTCAGACTCTTACTTGATAAAGCCTACAAGTTGTCACAAGAATGGGGCAACATCCCTGTTATTATTGCTGGGGATTTAAATAGTCTTCCACAGAGTGCAATATATAAGTTTGTGTCTTCATCCAAGCTAGACATCCAATTTCATAATCGCAAAAACATGTCAGGTCAGCTTGAAATCCAGTCCAATGATAGGATCTTCAGATCAGAGATTGGTGATGATGCTAGCATTTCAGTGTCGGTTTCAAGGCAATTGCTACACAAATGGAATGTAGAAGAACTAAGGCTTGCAACTGGTGCAGAAGGAGTCACTCATCTTCAGCACCATCTCAAGCTATGCAGTGCTTATAGTGGTGTTCCGGGAAACCAGAGAACAAGAGATGATATTGGTGAGCCCTTGGCGACATCATACCACTCCAAGTTTATGGGAACAGTTGATTATATCTGGCATTCTGAGGAACTTACTCCAGTTAGAGTTCTCGAAACCTTACCGATTGATATTCTTAGAAGAACTAGAGGACTCCCTAATGAGAAATGGGGAAGCGATCACCTCGCTGTTGTGTGTGAATTGGCGTTCACAAACAATGATAATTTGTCATGA 1437 0.4384 MARVKGTLLLVPQPPHRRLRRRFTEHCLLLDSVPRVMKLSERIRNRTRTSPQLPSGDMVRRRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFSRRWVFSSKDCSNCMDKVVVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEVDHFNDLDGLFQNNGFKGVYKARTGGARDGCAIFWKDKLFNLLHQEDIEFQRFGLRNNVAQLCVFEVNRDRPESDTCELTAVTPSSGKKRFIVGNIHVLFNPNRGDIKLGQVRLLLDKAYKLSQEWGNIPVIIAGDLNSLPQSAIYKFVSSSKLDIQFHNRKNMSGQLEIQSNDRIFRSEIGDDASISVSVSRQLLHKWNVEELRLATGAEGVTHLQHHLKLCSAYSGVPGNQRTRDDIGEPLATSYHSKFMGTVDYIWHSEELTPVRVLETLPIDILRRTRGLPNEKWGSDHLAVVCELAFTNNDNLS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2089 478 Gene3D Endonuclease/exonuclease/phosphatase 96 477 IPR036691 -
Lja2g2089 478 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 66 471 - -
Lja2g2089 478 PANTHER PROTEIN ANGEL 66 471 - -
Lja2g2089 478 SUPERFAMILY DNase I-like 116 470 IPR036691 -
Lja2g2089 478 MobiDBLite consensus disorder prediction 41 90 - -
Lja2g2089 478 Pfam Endonuclease/Exonuclease/phosphatase family 119 462 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2089 Lja-Chr2 23095123 23107272 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2089 - - gmx:100777474 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2089 2 23095123 23107272 Lja2g2089 2 23095123 23107272 ECH