Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2079 ATGGCTTCTTCGAGGGTACCCATTCCCAAGCTGGGTTCCTTCCGCTACAGCTTCAAGGAGAGGAAGGAGAAGCTCCTCTCCATGAAGAGCAGCCTCATCGGCTACTCCCAAATCGGTATCCCTCTCCCGGAGTCCGACGATGACAACGACGGACCTCCAGGGAGTAAGAACTGCTGCAGATTCTGCTCGTACCGCGCCCTCTCCGACAGGCTCGTCGGCGCGTGGAAGACGACGAAGCGCGTGGCGGCGAGGGCGTGGGAGATGGGTCTTTCTGATCCGAGGAAGATCGTGTTTGCGGCGAAGATGGGTCTCGCTCTTATACTCATTTCGTTGCTGATTTTCCTCAAGACGCCGTTTGAGGATTTGGGTCGACACTCTGTTTGGGCTATTCTCACTGTTGTTACAGTCTTTGAATTCAGCATTGGAGCAACTCTTAGCAAAGGACTTAACCGAGGATTGGGGACTTTGACAGCTGGAGGACTTGCTGTGGGAATGGGAGTGTTATCAAAATTGGCTGGACAATGGGAAGAAATCATAGTAATGGTTAGCATCTTCATTGTAGGATTTTGTGCCACATACGCAAAACTATACCCAACGATGAAAGCGTATGAATATGGTTTCCGTGTGTTCTTGATCACCTATTGCTACATTATTGTATCGGGGTATCAAACGGGAAAATTTATTGATACAGCCGTCAGTAGATTTTTGCTCATTGCGCTTGGTGCTGCTGTATCATTGGGGGTAAATGTATGCTTGTATCCAATCTGGGCTGGAGAGGATCTACATGATCTTGTGGCAAAAAATTTCATGGGGGTTGCAGCATCACTAGAAGGTGTTGTCAATAATTATCTTAATTGTATTGAATATGAGAGGGTGCCTTCAAAAATTCTTACGTATCAAGCCTCTGATGATGTGGTCTACAGTGGCTACCGATCAGCTCTTCAATCTACAAGCACAGAGGATGCATTGATGGGTTTTGCTGTCTGGGAGCCACCTCATGGTCGTTATAAAATGCTTAAATATCCATGGAGTAATTATGTGAAAGTAAGTGGCGCACTAAGGCATTGTGCATTTATGGTCATGGCTATGCATGGATGTATACTTTCTGAAATACAGGCTCCAGCTGAGAAGAGACAAGTTTTCAGCAACGAGATAAAGAAGGTGTGTTCTGAAGGGGCTAAACTTCTACGGGAACTTGGGAACAAGGTTAAAAAGATGGAGAAACTAGGCCAGGAAGACTTTCTTTTTCAAGTACTCGAGGCAGCAGAAGAGTTGCAACTGAAGATAGATAAAAAATCTTTCCTTCTTGTAAATTCAGAGTGCTGGGAAATCGGAAACCGGCCAAAAAAGGAAGGTGATTCTCAAGACCTCTTGAACATGGACGAAGAAAGACAGTTTCTGGAGTACAAGTCTCTTAGTGAAGCCGTGCTTGATCTCAGAGCTGTCAGAGTTCCGAAAAGTTGGGAAGGACACGGAACACACGTTGCTCCTGACATTAACCACGCAGTGCGTGATGAAAACATGTTCAAGTCACAGATATCTTTGCCTGCCCATATTTCCTTGAGGCCAGATGCTTTGATAAAAGAGGCTGAATCAAAAACCTATCAGAGTGCTAGTTCACTGTCTTTGGCAACATTCACATCCCTTTTGATTGAGTTTGTGGCAAGGCTCCATAACCTAGTGGATTCTTTTGAAGAATTGGGTGAGAAAGCAAACTTCAAGGACCCTCTTGAGATGCAAGCACCAGCAACTTCTGGTGGGTGTTGGACAAGGTTGTTTAACTGTTTGAAAGGTAACGATTGA 1803 0.4548 MASSRVPIPKLGSFRYSFKERKEKLLSMKSSLIGYSQIGIPLPESDDDNDGPPGSKNCCRFCSYRALSDRLVGAWKTTKRVAARAWEMGLSDPRKIVFAAKMGLALILISLLIFLKTPFEDLGRHSVWAILTVVTVFEFSIGATLSKGLNRGLGTLTAGGLAVGMGVLSKLAGQWEEIIVMVSIFIVGFCATYAKLYPTMKAYEYGFRVFLITYCYIIVSGYQTGKFIDTAVSRFLLIALGAAVSLGVNVCLYPIWAGEDLHDLVAKNFMGVAASLEGVVNNYLNCIEYERVPSKILTYQASDDVVYSGYRSALQSTSTEDALMGFAVWEPPHGRYKMLKYPWSNYVKVSGALRHCAFMVMAMHGCILSEIQAPAEKRQVFSNEIKKVCSEGAKLLRELGNKVKKMEKLGQEDFLFQVLEAAEELQLKIDKKSFLLVNSECWEIGNRPKKEGDSQDLLNMDEERQFLEYKSLSEAVLDLRAVRVPKSWEGHGTHVAPDINHAVRDENMFKSQISLPAHISLRPDALIKEAESKTYQSASSLSLATFTSLLIEFVARLHNLVDSFEELGEKANFKDPLEMQAPATSGGCWTRLFNCLKGND* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2079 600 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 10 597 - -
Lja2g2079 600 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 10 597 - -
Lja2g2079 600 Pfam Aluminium activated malate transporter 86 568 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2079 Lja-Chr2 22941887 22954426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2079 10 576 Miscellaneous Gene Families AT3G18440 60.997 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2079 - - gmx:100810157 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2079 2 22941887 22954426 Lja4g0151 4 1163105 1166543 ECH
Lja2g2079 2 22941887 22954426 Lja2g2079 2 22941887 22954426 ECH