Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2069 ATGGATGCTCCGCAAGGTGGATCCGGATCCGGACCCGACCGGGACAAACCCAACGCTCCGATCCCCGTCGTCTCCGCCTTCTGGAAAGAATTTGATTTGGAGAAGGAGAAGTCGATTTTGGATGAACAAGGGCTTCGGATTGCAGAGAACCAGGAAAACAGTCAGAAAAATAGGCGCAAGCTTGCTGAGAACACTAGAGGCTTCAAGAAAGCTTCACCTGAGGAGAAGTTAGGCTTGTTTAATAGCTTGCTTAAGGGCTACCAGGAAGAGGTTGACAATCTTACTAAGAGAGCGAAGTTTGGAGAAAATGCTTTTCTCAACATCTATCAGAAGCTTTATGAAGCTCCGGATCCTTATCCAGCGCTTTCATCGATTGCTGAGCAAGATCTCAAGTTATCTGAGATTGAATCTGAAAACCGAAAAATGAAAGTTGAGCTTGAAGAATTCAGGACAGAGGCAACTCACTTGAAGAATCAGCAGGCAACAATACGTAGACTTGAAGAGAGAAATAGGCAATTAGAGCAACAGATGGAAGAGAAAGTGAAAGAAATTGTGGAGATTAAGCAACGCAGTCTGGCAGAAGAGAACCAGAAAACATTGGAAATTTTGAAAGAAAGAGAACAAGTACTGCAAGATCAGTTGCAGAATGCCAAAGAAAGTGTTTCCAATATGCAGAAATTGCATGAGCTTGCACAAAACCAGCTGTTTGAACTCCGTGCCCAATCTGATGAAGATAGGGCAGCTAAGCAATCAGAGGTCACTCTTCTGATGGATGAAGTTGAACGAGCTCAAACAATGCTTCTTAGTTTGGAAAGACAGAAGGGGATGCTCCAGTCACAGTTACACACGGCAAATGAAGATACTGAGATCAAGAAGAGTGATAATTTAGACACGAATAGTGTGCTTGAGAATTCTTTAAATGCCAAAGAGAAGCTAATCTCTGAATTGAACATGGAGCTACACAATATTGAAACAGCCTTATCAAATGAAAGAGAAGAACACATAAATGAAGTCAAGAAACTTACTGCAATGCTCAATGAAAAGGAGACTGCTCTTGAGGAGATGAAGAAGGAGCTCCAAACAAGACCTACAGAAAAAATGGTTGATGATCTGCGCAAGAAAGTGAAAATTTTGCAGGCAGTGGGTTATAATTCAATTGAGGCTGAAGATTGGGAAGTGGCTACAAGTGGGGAGGAGATGAGCAAGATGGAGTCTCTTCTTCTTGATAAGAACCGTAAAATGGAACATGAACTAACACAGTTGAAGGTTACCCTTTCTGAGAAAACATCCTTACTGGAAACAGCAGAACAGAAGATTACAGAACTTGCAGCAAAGGTTAATGAGCAACAAAAATTGATACAGAAGTTGGAAGATGATATCCTGAAGGGATATAGTTCCAATTCTAAAGATCGTAAAGGGACCTTCCTTGATGACTGGGATCTTTCAGAAGCTGGTGGCGGTGAGGCTTCTGAGCAGAGTACAGCAGACCAAAGGCAAGTGGCCTTGGACCAAGATCAGAGCTCAATGCTTAAAGTGATCTGTAATCAGAGAGATCGATTTAGGACACGCTTGCGAGAGACAGAAGAGGAAATAAGGCAGTTGAAGGAGAAGATTGGGGTATTAACAGTGGAATTGGAAAAGACCAAAGCTGATAATGTCAAACTATATGGGAAGATTCGTTATGTGCAAGATTATAGTCTTGAGAAAGTGGTTTCTAGGGGTTCTAAAAAGTATGCAGAAGATGTTGAAAGTGGTTTTGCATCAGATGTTGAATCTAAATACAAGAAGATATATGAGGATGATATAAATCCTTTTGCAGCATTCTCAAAAAAGGAAAGGGATCAAAGATACAAGGAATTGGGATTCAGGGACAGAATTACGCTCAGCAGTGGGCGTTTTCTCCTTGGTAACAAGTATGCCCGGACTTTTGCATTCTTTTACACCATTGGATTGCATGTTCTGGTCTTCACCTGTCTCTACCGAATGTCTGCTCTGAGCTATCTTAGTAATGGCCCAGAGGAATTCCTAATTGGAGAGAAAAACGTTGATCTTCCACGTGCACCGTAG 2067 0.4185 MDAPQGGSGSGPDRDKPNAPIPVVSAFWKEFDLEKEKSILDEQGLRIAENQENSQKNRRKLAENTRGFKKASPEEKLGLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALSSIAEQDLKLSEIESENRKMKVELEEFRTEATHLKNQQATIRRLEERNRQLEQQMEEKVKEIVEIKQRSLAEENQKTLEILKEREQVLQDQLQNAKESVSNMQKLHELAQNQLFELRAQSDEDRAAKQSEVTLLMDEVERAQTMLLSLERQKGMLQSQLHTANEDTEIKKSDNLDTNSVLENSLNAKEKLISELNMELHNIETALSNEREEHINEVKKLTAMLNEKETALEEMKKELQTRPTEKMVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQLKVTLSEKTSLLETAEQKITELAAKVNEQQKLIQKLEDDILKGYSSNSKDRKGTFLDDWDLSEAGGGEASEQSTADQRQVALDQDQSSMLKVICNQRDRFRTRLRETEEEIRQLKEKIGVLTVELEKTKADNVKLYGKIRYVQDYSLEKVVSRGSKKYAEDVESGFASDVESKYKKIYEDDINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCLYRMSALSYLSNGPEEFLIGEKNVDLPRAP* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2069 688 MobiDBLite consensus disorder prediction 52 68 - -
Lja2g2069 688 Coils Coil 45 65 - -
Lja2g2069 688 MobiDBLite consensus disorder prediction 1 20 - -
Lja2g2069 688 Coils Coil 510 551 - -
Lja2g2069 688 MobiDBLite consensus disorder prediction 47 68 - -
Lja2g2069 688 Coils Coil 84 104 - -
Lja2g2069 688 Coils Coil 253 287 - -
Lja2g2069 688 PANTHER HOMEOBOX PROTEIN CUT 21 672 - -
Lja2g2069 688 Coils Coil 125 190 - -
Lja2g2069 688 Pfam CASP C terminal 434 665 IPR012955 GO:0006891|GO:0030173
Lja2g2069 688 Coils Coil 193 241 - -
Lja2g2069 688 PANTHER CCAAT DISPLACEMENT PROTEIN-RELATED 21 672 - -
Lja2g2069 688 Coils Coil 299 358 - -
Lja2g2069 688 Coils Coil 418 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2069 Lja-Chr2 22756526 22768006 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2069 K09313 - gmx:100780863 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2069 2 22756526 22768006 Lja2g2069 2 22756526 22768006 ECH