Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1421 ATGGAGAGGCCGGGGAATTCGGTGGCGGCGGCGACGACGGCGACTTCAAGCCGCGAAGCGTATGTGAGCTGGGAGGAGGTTTTTGTCTCCGGTCGGAAGGGAAGGAAGGAGGTTTACTATCTGCTGAAACGGAGAGGCGGTGGTTCCGATCTGGCGGTTGTTGGCAAAGAGAAGAGCTCGACTCACATGTCTTATCACATAAGGAACGCTTCGTTGGGTCCCTATTCGAAGCTCAGAACGAGAAGAGAGGTTATCGATTGGTTGGATTCAATCGTTGCAGATTCGTCTGCAATTATGGTGGGCAAGCCGGGTCGTGAACCGGAAATTGGAACCTTGAAGGAGAATCGATGTCAGAAGATGCCCCAGCCTATGAAAGAAACCTCGTGGATAGGGGTTCCATGGACCTGTAGGAAAAAAAGAAAGCACTATCAGTCGTTTAAGCGGAATGGTTATCAGATTTCTGTGTATGACTTTGTACTTATTCTAGCAGAAGAGCACAAGCATCTAGTTGCCTACCTGGAAGACATGTTTGAGGATTCCAGAGGCAGCAAGATGGTTGTGGTTCGCTGGTTTCACAAAATTGATGAGGTTGGTATCGTTTTGCCTCGCAATTTTAGTGACCGTGAGGTTTTCTTTTCTCCTTATCTTCAAGATCTGAGTGTTGAATGCATAGATGGAATGGCGACAGTTCTCAGTCCCCAGCATTACGAAAAGTTTCAGAACGAAGCCTGTCATACTCACCCGGAACCGCCATTCATATGCTACCAGAAATTCGAAAAAGATGATGTCAAACCCTTTGATATAACTCAAATTAGGGGTTACTGGAAACAAGAAATTCTCAGGGACATGTATACCGTCTCTGACTCAAAGTCTAACGGGAGTTCAGGGCAATCTGATGATGGCCCAGAATTGGAAGAAAACCTCCAGTCAACTATTGCTGGGATCAGACCTAAGAAGAGACAACGCCGTGCAAAAGAAGACCGCAAAGATGTGCTTGATCCAGCTTCTTCAAAATGGGATAACATGAGTAATAGTAAGATTGATACCAAAATTAGTACAGGAAACAATTCCTTGAAGTTGGCTGGGCCCGCCACAACGGCCACCACCAAAGCTACAAATGGGGATGCTCCACAGTATTTAGATGTAGGTTCCCGAGTTGAGGTCCTCTCTCAAGACAGTGGGATTAGAGGATGCTGGTTCAGAGCTTCTATCATTAAAAAGGCCAAAGATAAAGTGAAGGTGCAATATCAAGACATTCAGGATGTAGTTGAAGAAGATAAAATGCTTGAGGAATGGGTTTTGGCGTCCAGAATTGCAGTGCCTGATGATCTGGGTCTTTGGATGCATGGTAGGACCAGGGTCCGGCCTGCTCCACCGTCAACTAAAAGCAAAATATCCTGGGTGGGTGCTGTTGGTTCAGTTGTTGAGGCCTGGTGGAATGATGGATGGTGGGAAGGCATCATTATTCAAAAAGAGTCTGAAGCTAATTATCATGTTTATTTCCCAGGGGAAAAGATGTTGTTGGTTTTTGAGCCTGGTAATTTAAGACATGCTCAAGAGTGGACAGGGAATGAGTGGGTTAAAGTGAGGGAAAGGCCTGAACTTGTGACTTCTGTATTATCAAGCTTGAAAGTGAAAGTGAAACAAATGCCAAGCAAATCCTGTGACAGCAAATCAACTATAGCATCTACTGGTGATGGAGTACAATCTAAACTGGCTGAGACTGGCTTAGATTCTCAAACAGATAAACCTAGGAAGTCTGAAGTTGTTCCAGATCTTTTGAAAGGTGAAGTGTTAAGGTGGAAGTCCTCCAGGAAGAGGAGTCGAAGTGGCGCCTCTCGTCGTAAGGTACTGCGAAATGACAGACCGTGTACGAAGTCCCCTCAGATTCTGGAGTCAGATGCTTCTGATAGCTTCGTGATTCCAGCATCACTGAATGTTGATCATGATGACTGCAAATTTGCTGGGGATCCAACCATTTTCAATTCTTCAGTTGTGCCGTCTCTAACTAATTTGGTTATGTGTAGGTGA 2031 0.4549 MERPGNSVAAATTATSSREAYVSWEEVFVSGRKGRKEVYYLLKRRGGGSDLAVVGKEKSSTHMSYHIRNASLGPYSKLRTRREVIDWLDSIVADSSAIMVGKPGREPEIGTLKENRCQKMPQPMKETSWIGVPWTCRKKRKHYQSFKRNGYQISVYDFVLILAEEHKHLVAYLEDMFEDSRGSKMVVVRWFHKIDEVGIVLPRNFSDREVFFSPYLQDLSVECIDGMATVLSPQHYEKFQNEACHTHPEPPFICYQKFEKDDVKPFDITQIRGYWKQEILRDMYTVSDSKSNGSSGQSDDGPELEENLQSTIAGIRPKKRQRRAKEDRKDVLDPASSKWDNMSNSKIDTKISTGNNSLKLAGPATTATTKATNGDAPQYLDVGSRVEVLSQDSGIRGCWFRASIIKKAKDKVKVQYQDIQDVVEEDKMLEEWVLASRIAVPDDLGLWMHGRTRVRPAPPSTKSKISWVGAVGSVVEAWWNDGWWEGIIIQKESEANYHVYFPGEKMLLVFEPGNLRHAQEWTGNEWVKVRERPELVTSVLSSLKVKVKQMPSKSCDSKSTIASTGDGVQSKLAETGLDSQTDKPRKSEVVPDLLKGEVLRWKSSRKRSRSGASRRKVLRNDRPCTKSPQILESDASDSFVIPASLNVDHDDCKFAGDPTIFNSSVVPSLTNLVMCR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1421 676 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 11 675 - -
Lja2g1421 676 MobiDBLite consensus disorder prediction 604 629 - -
Lja2g1421 676 ProSiteProfiles BAH domain profile. 151 269 IPR001025 GO:0003682
Lja2g1421 676 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 11 675 - -
Lja2g1421 676 Gene3D - 123 268 IPR043151 -
Lja2g1421 676 SMART BAH_4 151 269 IPR001025 GO:0003682
Lja2g1421 676 MobiDBLite consensus disorder prediction 309 350 - -
Lja2g1421 676 Pfam Agenet domain 383 459 IPR008395 -
Lja2g1421 676 SMART agenet_At_2 467 523 IPR014002 -
Lja2g1421 676 SMART agenet_At_2 378 444 IPR014002 -
Lja2g1421 676 Pfam BAH domain 153 249 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1421 Lja-Chr2 13643503 13647062 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1421 - - gmx:100306709 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1421 2 13643503 13647062 Lja2g1421 2 13643503 13647062 ECH