Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1420 ATGGTAGGCTGCACACATATCACAGGTATGGCTTTTGAAGATGGTGCCAAAAAGGAGATTCAGGAAGTTGGTAGAAAAATCTCTATTGGGTCTAGTCTAGCATCTATGGAGTCTTTGTCCATGCCACTGGTTCAGGAGGTTGTTCTTTCTGCAGACATGCAATGTGAGAAGTGCCAGAAGAGGGTTACTGATATTATTACAAAAATGAATGTAGAGACAGAGTCTGTGGTGGTGAATGTGTTGGAGAAGCAAGTGACACTCACTTTTAGATTTCCAACTGTTGGTGAAGTAATCAGTAAGCAAATTACTCGCATCAACAGGAATCCCCTCCCTAAAAAAGTGGCCATTATCAAAAGGATATTTCGCTCTTCCAAAGGATCCACATGTGCACAATGA 396 0.4167 MVGCTHITGMAFEDGAKKEIQEVGRKISIGSSLASMESLSMPLVQEVVLSADMQCEKCQKRVTDIITKMNVETESVVVNVLEKQVTLTFRFPTVGEVISKQITRINRNPLPKKVAIIKRIFRSSKGSTCAQ* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1420 131 Gene3D - 43 108 - -
Lja2g1420 131 PANTHER OS08G0431150 PROTEIN 5 85 - -
Lja2g1420 131 PANTHER PROTEIN, PUTATIVE-RELATED 5 85 - -
Lja2g1420 131 SUPERFAMILY HMA, heavy metal-associated domain 46 104 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1420 Lja-Chr2 13639460 13641925 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1420 - - gmx:102659685 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1420 2 13639460 13641925 Lja2g1420 2 13639460 13641925 ECH