Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1406 ATGAAGAGTGCCATTTGTGGCAGAATGGGTCTCTCTCCCAACCACGTCTTCGCACCAGGGGACAAATATTCTTTTTGTGTGGGACCATGTTCCAATGTTTGCATTCCCATGGCTGCATTAGCAACAGGACCTGGTAAAGGGGGAGGTCTGCTGGAAAAGCCAGTTATTGAGAAAGTCTCCCCTGGCCGTGAATCTGAATTTGATTTGAAGAAATCGCGGAAATCATCACCTCCATATCGTGTAATATTACACAATGACAACTTCAATAAACGAGAATATGTTGTTCAAGTGCTGATGAAGGTCATCCCTGGAATGACTCTTGATAATGCAGTTAACATCATGCAAGAAGCACACCACAATGGATTGTCAGTGGTGATTATCTGTGCACAAGCTGATGCTGAAGATCATTGCATGCAACTAAGAGGCAATGGGTTACTCAGTTCAATTGAACCTGCAGGTGGTGGATGCTGA 471 0.4437 MKSAICGRMGLSPNHVFAPGDKYSFCVGPCSNVCIPMAALATGPGKGGGLLEKPVIEKVSPGRESEFDLKKSRKSSPPYRVILHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHHNGLSVVIICAQADAEDHCMQLRGNGLLSSIEPAGGGC* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1406 156 PANTHER BNAA07G24510D PROTEIN 1 156 - -
Lja2g1406 156 Gene3D - 73 151 IPR014719 -
Lja2g1406 156 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 156 IPR022935 GO:0006508
Lja2g1406 156 SUPERFAMILY ClpS-like 73 150 IPR014719 -
Lja2g1406 156 Pfam ATP-dependent Clp protease adaptor protein ClpS 75 142 IPR003769 GO:0030163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1406 Lja-Chr2 13527224 13530921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1406 K06891 - gmx:100527361 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1406 2 13527224 13530921 Lja2g1406 2 13527224 13530921 ECH