Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1362 ATGAGTAGTTTTGCAGAAAGAAAGCCACACGCAGTGTTAACTCCATCTCCTCTCCAAGGCCATATCAATCCACTGTTTCAACTAGCCAAGCTTCTTCACCTTAGAGGCTTTCACATAACCTTTGTCCACACTGAATACAACCATAAACGCTTGATCAAATCAAGAGGTCCAAACGCCCTTGATGGCCTCCCTGACTTTGTCTTTGAGACCATCCCAGATGGTCTTGAAGATGGTGATGGTGAGGTCAGTCAAGACTTATACTCTCTCTGTGATTCAATCAGAAACAAGTGTCACCTCCCCTTTCAAGACCTTCTTGCTAAACTTCACCGCTCTGCCTCTGCTGGTCTTGTCCCCCCAGTTACCTGCTTAGTTTCTGATTTACTCATGACCTTCACTATCCAAGCTGCTCAACAACTTCAACTCCCTATTCTTCTCCTTTGTCCAGCCAGTGCATCTACTTTCATGTCTTTCTTGCACTTCCAGACACTGCTTGATAAGGGTGTCATACCACTCAAAGATGAGAGTTATCTGACAAATGGATATTTGGACACTAAAGTAGATTGGATTCCCGGAATGCAAAACTTTAGACTCAAAGACCTTCCTGACTTCATAAGGACAACAGATCCGAATGATATAATGCTAGAATTCATGGTTGAAGTTGCAGATAGAGCTAAGAGAGCATCTGCTATTGTTTTTAATACTTTTAATGAGCTTGAGAGAGATGTACTCAGTGCTCTCTCCACTATGCTTCCTTCTCTGTACCCCATTGGCCCTTTCCCTTCATTTTTAAACCAAGCTCCACAGAACCAATTGGCATCCTTGGGTTCCAATCTTTGGAAAGAAGACACCAAGTGTCTCCAATGGCTTGAATCAAAGGAACCCGGGTCAGTTGTTTATGTGAATTTTGGCAGCATTACTGTCATGTCGCCAGAGCAACTCTTGGAGTTTGCTTGGGGTTTGGCAAACGGCAAGAAGCCCTTTTTGTGGATCATTAGGCCTGACCTTGTCGCCGGTGGCTCCGCGATTTTGTCGCCGAAGTTTGTCGATGAAACTTCAAATAGAGGCCTAATAGCAAGCTGGTGTCCACAGGAGAAAGTGTTGAACCACCCTTCAGTTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACCATTGAAAGCATCTGTGCAGGAGTGCCAATGTTGTGTTGGCCATTTTTTTCAGATCAGCCCACAAACTGTAAATGGATTTGCAATGAATGGGATATTGGGATGGAAATTGATACCAATGTGAAGAGAGAGGAGGTGGAGAAGCTGATCACTGAATTGATGGTGGAAGAGAAAGGAAAGAAGATGAAGCAAAAAGCCATGGAGTTGAAGAAGAAGGCAGAGGAGGACACTAGGCCTGGTGGTTGTTCATACTTGAACTTGGACATAGTGATTAAGGAGGTGTTGCTTAAACAATAA 1446 0.4398 MSSFAERKPHAVLTPSPLQGHINPLFQLAKLLHLRGFHITFVHTEYNHKRLIKSRGPNALDGLPDFVFETIPDGLEDGDGEVSQDLYSLCDSIRNKCHLPFQDLLAKLHRSASAGLVPPVTCLVSDLLMTFTIQAAQQLQLPILLLCPASASTFMSFLHFQTLLDKGVIPLKDESYLTNGYLDTKVDWIPGMQNFRLKDLPDFIRTTDPNDIMLEFMVEVADRAKRASAIVFNTFNELERDVLSALSTMLPSLYPIGPFPSFLNQAPQNQLASLGSNLWKEDTKCLQWLESKEPGSVVYVNFGSITVMSPEQLLEFAWGLANGKKPFLWIIRPDLVAGGSAILSPKFVDETSNRGLIASWCPQEKVLNHPSVGGFLTHCGWNSTIESICAGVPMLCWPFFSDQPTNCKWICNEWDIGMEIDTNVKREEVEKLITELMVEEKGKKMKQKAMELKKKAEEDTRPGGCSYLNLDIVIKEVLLKQ* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1362 481 ProSitePatterns UDP-glycosyltransferases signature. 360 403 IPR035595 -
Lja2g1362 481 CDD GT1_Gtf-like 9 458 IPR002213 GO:0008194
Lja2g1362 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 212 452 IPR002213 GO:0008194
Lja2g1362 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 471 - -
Lja2g1362 481 Gene3D Glycogen Phosphorylase B; 10 464 - -
Lja2g1362 481 Gene3D Glycogen Phosphorylase B; 280 458 - -
Lja2g1362 481 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 476 - -
Lja2g1362 481 PANTHER GLYCOSYLTRANSFERASE 6 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1362 Lja-Chr2 13028506 13030897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1362 6 481 Glycosyltransferase AT1G22380 54.280 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1362 - - gmx:100787108 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1362 2 13028506 13030897 Lja2g1362 2 13028506 13030897 ECH