Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1342 ATGGGTTATGTTGGGGATCACGGGGCTTCAACTTTGCATAGATACAAATATAGTGGTGTAGACCATTCCTACTTGGCCAAATATGTACTACAGCCCTTCTGGAGCCGCTTTGTTAATTTTTTCCCCTTATGGATGCCTCCAAACATGATAACTCTTATGGGATTTATGTTCTTACTATTGTCTGCATTGCTTGGCTATATATACTCACCTCGATTGGACTCAGCTCCTCCAAGATGGGTTCATTTTGCACATGGCCTACTTTTGTTTTTATACCAGACATTTGATGCTGTTGATGGGAAGCAAGCTAGAAGAACAAATTCTTCAAGCCCATTGGGGGAGCTGTTTGATCATAGATGTGATGCACTAGCTTGTACATTTGAAGCACTGGCTTTTGGGAGCACAGCCATGTGTGGAAGAAGTACTTTCTGGTGGTGGTTAATATCTGCTATTACATTTTATGGTGCAACCTGGGAGCATTACTTCACCAATACACTTATACTGCCTGTTGTTAATGGACCTACAGAGGGTCTTATGCTAATATACATGGCCCACTTTTTCACTGCTATTGTGGGTGCTGAGTGGTGGGTTCAGCGATTTGGGAAGTCTTTGCCTTTTTTGAATTGGTTGCCTTTTATTGGGGATATCCCGACATTCAGAGCAGTGTTGTGTTTGATGATAGTTTTTGGTGTTATACCAACAGTCACATTCAATGTTTGTAATGTTTATAAAGTTGTGAAGTCAAGAAATGGAAGCATGCCGCTTGCATTGGCAATGCTTTACCCATTTGTTGTACTCGTGGGAGGAGTGCTCGTGTGGAATTATTTGTCACCGTCTGACATCATAGGGAATTATCCACATTTAGTTATTTTAGGAACTGGACTTACTTTTGGATATCTTGTGGGAAGGATGATTTTGGCCCACTTATGCGACGAACCTAAGGGCTTAAAAACTGGAATGTGCATGTCCCTCCTGTATCTCCCATTTGCCATTGCTAATGCGCTTGCATCTAGGCTAAATGATGGGATTACTTTAGTGGATGAGAGATTAGTTCTTCTTGGTTACTGTGCATATACAGGGACACTTTACTTGCATTTCGCAATGTCTGTCATTCATGAAATTACAAATGCCCTGGGAATATATTGTTTCAGGATAACTAGGAAGGAAGCTTGA 1170 0.4128 MGYVGDHGASTLHRYKYSGVDHSYLAKYVLQPFWSRFVNFFPLWMPPNMITLMGFMFLLLSALLGYIYSPRLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHRCDALACTFEALAFGSTAMCGRSTFWWWLISAITFYGATWEHYFTNTLILPVVNGPTEGLMLIYMAHFFTAIVGAEWWVQRFGKSLPFLNWLPFIGDIPTFRAVLCLMIVFGVIPTVTFNVCNVYKVVKSRNGSMPLALAMLYPFVVLVGGVLVWNYLSPSDIIGNYPHLVILGTGLTFGYLVGRMILAHLCDEPKGLKTGMCMSLLYLPFAIANALASRLNDGITLVDERLVLLGYCAYTGTLYLHFAMSVIHEITNALGIYCFRITRKEA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1342 389 PIRSF CHOPT 1 389 IPR014472 -
Lja2g1342 389 PANTHER CHOLINE/ETHANOLAMINEPHOSPHOTRANSFERASE 2 1 386 - -
Lja2g1342 389 PANTHER ETHANOLAMINEPHOSPHOTRANSFERASE 1 386 IPR014472 -
Lja2g1342 389 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 98 120 IPR000462 GO:0008654|GO:0016020|GO:0016780
Lja2g1342 389 Pfam CDP-alcohol phosphatidyltransferase 46 188 IPR000462 GO:0008654|GO:0016020|GO:0016780
Lja2g1342 389 Gene3D - 26 251 IPR043130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1342 Lja-Chr2 12831132 12838874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1342 49 389 Miscellaneous Gene Families AT1G13560 80.938 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1342 K00993 - gmx:732642 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1342 2 12831132 12838874 Lja2g1342 2 12831132 12838874 ECH