Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1330 ATGAGTGGTGCTGTTGGTTCCTGGGTTGCTCACCATCTGGCCTCCATTGACTGGCACCATGAATCCTACCCAGAGTTTCGTGATTTCTCCGTTCTACCCTTCCTCGCTCTCTTCTTCCCTTCCCTCCGCATCTTTCTCGACACCTTCGTCTTCGAGAAAGTCGCAAGACGATTGATTTTTGGAAGGGGACATGAGACGCTGGATTTTCAAACCAAGGAGAGAAGAAAAAAGATTAGAAAATTTAAGGAATCAGCATGGAAATTCGTTTATTTTCTATCCGCTGAAATTTTTGCTTTGTCTGTAATATATGATGAGCCTTGGTTGACTGACACAAAATATTTTTGGGCGGGGCCAGGGAATCAAATATGGCCAGAGCAAAAGATTAAATTGAGATTGAAGGGGCTCTATATGTATTGTGCTGGATTTTATTCATACTCCATACTTGCTTTAATATTTTGGGAAACAAAGCGCTCTGACTTTGGGGTTTCCATGAGCCATCATGTTGTTTCTCTTGGTCTCATTGTGTTATCATACACTTTAAGGTTTGTTCGAGTTGGATCAGTTGTTTTAGCTCTTCATGATGCTTCTGATGTGTTTCTGGAGACAGGGAAAATGTCCAAATATAGTGGTGCTGAGACAGTGGCTAGCTTTGCATTTGTTCTTTTTGTTTTGTCTTGGACCATACTGCGCATCATTTATTTCCCATTCTGGGTTCTTCGAAGCACAAGCTATGAAATTGTTCTCTGCCTTGATACGGAAGAACACCAGGCGGATGGTCCAATTTATTATTACGTGTTCAATACTCTTCTATTCTTCTTGCTTGTTATTAATATTTATTGGTGGGTGCTGATGCTTCGAATGCTTGTCAATCAAATCCAAGCAAGAGGAAAAGTTAGTGAAGATATTCGGTCTGATTCGGAAGATGAACATGAACATGAAGAATAA 945 0.4063 MSGAVGSWVAHHLASIDWHHESYPEFRDFSVLPFLALFFPSLRIFLDTFVFEKVARRLIFGRGHETLDFQTKERRKKIRKFKESAWKFVYFLSAEIFALSVIYDEPWLTDTKYFWAGPGNQIWPEQKIKLRLKGLYMYCAGFYSYSILALIFWETKRSDFGVSMSHHVVSLGLIVLSYTLRFVRVGSVVLALHDASDVFLETGKMSKYSGAETVASFAFVLFVLSWTILRIIYFPFWVLRSTSYEIVLCLDTEEHQADGPIYYYVFNTLLFFLLVINIYWWVLMLRMLVNQIQARGKVSEDIRSDSEDEHEHEE* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1330 314 ProSiteProfiles TLC domain profile. 79 293 IPR006634 GO:0016021
Lja2g1330 314 PANTHER LAG1 LONGEVITY ASSURANCE HOMOLOG 3 13 313 - -
Lja2g1330 314 PANTHER LONGEVITY ASSURANCE FACTOR 1 LAG1 13 313 IPR016439 GO:0046513|GO:0050291
Lja2g1330 314 SMART lag1_27 79 293 IPR006634 GO:0016021
Lja2g1330 314 Pfam TLC domain 80 286 IPR006634 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1330 Lja-Chr2 12711561 12716582 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1330 - - lja:Lj2g3v1197780.2 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1330 2 12711561 12716582 Lja2g1330 2 12711561 12716582 ECH