Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1315 ATGGCTTACCGAGAAACCTCTCTGTTGGTGCCTTCTGTGAAGGAGCTGCTAGCAAAGCAACCCATCACCCAAGTTCCAGAACGGTATGTTCGTCCAGATCAAGACCCACCTCTAGTCTCTAACACATACGCAGCCACTTTATCACAACAAGTTCCTGTTATTGACCTGCATAAACTGTTGTCTGAACATGATTCTCATGAGCTACAAAAGCTGGACCATGCCTGCAAAGAATGGGGTTTCTTCCAGCTGATTAATCATGGAGTCAATCCTTCACTGGTGGAAAACATGAAGAAAGGTGTTCAAGACCTCTTCAACCTTCCAATAGAAGAAAAGAAGAAGCTTTGGAAAACACCAGAAGATGGGCAGGGGTTTGGTCAGTTGTTTGTTGTGTCTGAGGAACAAAAGCTTGAATGGGCAGATGTGTTCTACATTAACACTTTCCCTTTAAACAAAAGGAATCCACGCCTTATTCCTAGTATTCCCCAACCATTCAGAGATAATCTAGATGCATATAGTTCAGAACTGAAAAACATCTGTGTCACCATGATTGGCCTTATGGAGAAAGCTCTGAAGACTGAAACTAACGAATTTGTGGAGTTGTTTGAAGATGCAAGTCAAGGAATGAGGATGAATTACTACCCTCCATGTCCTCAACCAGATAAAGTTATTGGACTCAATCCTCATTCTGATGCTGGGGCCTTTACCATCCTTCTCCAAGTCAATGAAATGGAAGGCCTTCAAATAAGAAAAGATGGAATTTGGGTTCCTATTAAACCCCTTTCTAATGCTTTTGTCATCAACATTGGAGACATGTTGGAGATACTAACAAATGGAATTTACCGGAGCATTGAGCATCGAGCAATAGTCAATTCAGAGAAGGAGAGGATCTCCGTTGCTACATTTCACAGGCCGACAATGAACGGAATCTTAGGTCCAACAACAAGTCTTGTTACTTCCGAAAGACCTGCTTTATTCAGAAAAATTGGTGTAGCAGATTACCTCAATGGTTTTCTTTCGCGTGAGCTACAAGGGAAATCACACTTGGAAGTCGTTAGGATCCATGACGAGATTGGGAAATAG 1080 0.4213 MAYRETSLLVPSVKELLAKQPITQVPERYVRPDQDPPLVSNTYAATLSQQVPVIDLHKLLSEHDSHELQKLDHACKEWGFFQLINHGVNPSLVENMKKGVQDLFNLPIEEKKKLWKTPEDGQGFGQLFVVSEEQKLEWADVFYINTFPLNKRNPRLIPSIPQPFRDNLDAYSSELKNICVTMIGLMEKALKTETNEFVELFEDASQGMRMNYYPPCPQPDKVIGLNPHSDAGAFTILLQVNEMEGLQIRKDGIWVPIKPLSNAFVINIGDMLEILTNGIYRSIEHRAIVNSEKERISVATFHRPTMNGILGPTTSLVTSERPALFRKIGVADYLNGFLSRELQGKSHLEVVRIHDEIGK* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1315 359 PANTHER OXYGENASE FAMILY OXIDOREDUCTASE, PUTATIVE-RELATED 6 354 - -
Lja2g1315 359 SUPERFAMILY Clavaminate synthase-like 17 345 - -
Lja2g1315 359 Pfam 2OG-Fe(II) oxygenase superfamily 208 304 IPR044861 -
Lja2g1315 359 Pfam non-haem dioxygenase in morphine synthesis N-terminal 51 151 IPR026992 -
Lja2g1315 359 Gene3D - 8 344 IPR027443 -
Lja2g1315 359 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 304 IPR005123 -
Lja2g1315 359 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 6 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1315 Lja-Chr2 12577469 12580052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1315 17 353 Glycosyltransferase AT5G59530 31.214 2.57e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1315 - - gmx:100775942 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1315 2 12577469 12580052 Lja2g1315 2 12577469 12580052 ECH