Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1195 ATGAGGAAGAATGGATGGCAGCTACCTTACCATCCACTTCAGGTGGTGGCCATTGCTGTATTTCTGGCTCTAGGGTTTGCCTTCTATGTGTTCTTTGCTCCTTTTGTTGGGAAGAAGGTGTATCAGTACATTGCTATGGGCCTCTACACACCCCTGATTACCTGTGTCTTTGGACTGTACATTTGGTGTGCAGCAGCTGATCCAGCAGATTCAGGGGTTTTTAAGTCCAAAAAGTACCTTAAAATTCCGGATAGCAAAAAGCTGGGTGGGCTGAAGGATTCTAAACTTGGAGCGGATTCGACTTCATCAATGCATGATGGAAATGCTTCAACAGTTGGACCAAAATCTGTGGATAAGGAAGCATTGGGAACAGAAGCAAGTTTTAAAGATGCTGCTATTTCAATAGAGAAGAAAAGTGCATCATCACCTTTACTATTAGTTTGCTCTCCTTGCGCTTATATCTGCTCCTGCTCTAGTTCAAGTGAAGAATCTTCTGATAAACAAACAAGTGAAGATGGCATGTTCTATTGCAGTTTGTGTGAAGTTGAGGTATTCAAGTACAGCAAGCACTGTAGAGTTTGTGACAAGTGTGTTGATCGCTTTGATCATCACTGCAGGTGGCTTAACAACTGTATTGGAAAAAAGAACTACCGACAGTTTTTCACCCTCATGGTTGCTGCTCTCCTCTTGCTTATTCTTCAATGGTTGACTGGAATACTTGTGCTCATCTGCTGTTTTATTAAGAGGAAGCAATTTTCGGTGGATGTTTCGTCCAAGTTGGGAAGCAGTTTCACACTGGCACCCTTTGTTATTGTGGTGGCAGTCTGCACCATTTTAGCTATGCTTGCTACCTTACCTCTTGCTCAACTTTTCTTCTTTCATATTCTTCTCATAAAAAAGGGAATCACCACATACGATTACATCATAGCTTTGAGGGAGCAGGAACAGGAGCAGCAAGGAGTTGGAGGTCAGCAGAGTCCCCAAATGTCGCCTGTTAGCTCACTTACTGGATTGAGTAGTGCAAGCTCCTTTACTACTTTCCGCCGCGGTGCATGGTGTACACCACCACGTCTGTTCCTTGAAGATCAGTTTGATGTAGTGCCCCCAGAAACAGCATCTGTAAGTTCACTTGGAAAGAAGTCTATCAGAGAAGAACCAGTTAAGAAAAAGAATCCTGCAGCAGTCAAAATTAGTCCATGGGCATTGGCACGGTTAAATGCAGAAGAAGTTTCCAAGGCTGCTGCAGAAGCAAGGAAAAAGTCGAAGATTCTGCAGCCTGTGGTAAGACAGAATGAGCCTTTCAGGCTAGAAGCAGATCACAACTCCGGCAGCAGTGGGCGTCGAATGGCCCCCAGGATTGATAACAGAAGGCGGCCAGGTAAACGGGCTCGCATGCCAGCTGACTTACCTACGGAGGCCCTGACAAGGTTTTCTGCCAGTAATATGAATAAAGGCTTCAGTGGAACATCTAGTTTAGCATCTCTCCAGCTTGAAACACAGGGTGGATTTCAAACAAGTCAAGCAGTGTCAAGCTCAGCTGGGATTGTTGCTTCTTCTCCTGAAAGCAGTTTAGACTCGCCTGATATTCACCCATTTCGCGTGTCTTCAACCGTAGCTGAAGAAGCAAGACGGCTTGGAGGTCTTTCTGCTGCTGCTGGTGCTGCAACACTGAAGGAATTCCCACTGTCAAGGTCAACAAGTGATGGGTATGAGGCCTCTGGTGGGGAAGATAGTGACCAGGTTCCCACAAGGATTGTTCAGAGATCAACAAATTGGTCTAATCTTCTTTTCAGTGCTGATCAGGATGACAGAACTTATGAGCCAAACTCATCATCTAGCCTGGCTCAGCATAGAAAGTGGTGA 1863 0.4525 MRKNGWQLPYHPLQVVAIAVFLALGFAFYVFFAPFVGKKVYQYIAMGLYTPLITCVFGLYIWCAAADPADSGVFKSKKYLKIPDSKKLGGLKDSKLGADSTSSMHDGNASTVGPKSVDKEALGTEASFKDAAISIEKKSASSPLLLVCSPCAYICSCSSSSEESSDKQTSEDGMFYCSLCEVEVFKYSKHCRVCDKCVDRFDHHCRWLNNCIGKKNYRQFFTLMVAALLLLILQWLTGILVLICCFIKRKQFSVDVSSKLGSSFTLAPFVIVVAVCTILAMLATLPLAQLFFFHILLIKKGITTYDYIIALREQEQEQQGVGGQQSPQMSPVSSLTGLSSASSFTTFRRGAWCTPPRLFLEDQFDVVPPETASVSSLGKKSIREEPVKKKNPAAVKISPWALARLNAEEVSKAAAEARKKSKILQPVVRQNEPFRLEADHNSGSSGRRMAPRIDNRRRPGKRARMPADLPTEALTRFSASNMNKGFSGTSSLASLQLETQGGFQTSQAVSSSAGIVASSPESSLDSPDIHPFRVSSTVAEEARRLGGLSAAAGAATLKEFPLSRSTSDGYEASGGEDSDQVPTRIVQRSTNWSNLLFSADQDDRTYEPNSSSSLAQHRKW* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1195 620 ProSiteProfiles DHHC domain profile. 175 225 - -
Lja2g1195 620 MobiDBLite consensus disorder prediction 96 115 - -
Lja2g1195 620 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 8 515 - -
Lja2g1195 620 MobiDBLite consensus disorder prediction 433 470 - -
Lja2g1195 620 MobiDBLite consensus disorder prediction 96 110 - -
Lja2g1195 620 MobiDBLite consensus disorder prediction 597 620 - -
Lja2g1195 620 MobiDBLite consensus disorder prediction 564 585 - -
Lja2g1195 620 Pfam DHHC palmitoyltransferase 175 308 IPR001594 GO:0016409
Lja2g1195 620 PANTHER S-ACYLTRANSFERASE 8 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1195 Lja-Chr2 11334947 11340862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1195 163 218 Lipid Metabolism Gene Families AT4G22750 41.071 4.65e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1195 K20027 - gmx:100790525 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1195 2 11334947 11340862 Lja2g1195 2 11334947 11340862 ECH