Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1180 ATGTATTCATCCAGAGGTAGCGGCGGCGGCGGCGGCGCTTACGGCCAATCGTACACGGGTCAATCCACATACGGCCAGAACCTGGGTGCTAATTATTCTGGGAGTTCCGTTGGAGGCCATGATGTTACTCAACATTCCGTGGCTTCGAGGCATTCAGCGATATTAGGTGGGCAACAGGAAGTTGATGTTGCCGGGTATCGTCCCGCGCAGTATGGAGGTCAATATAGCTCTGTTTATGGCTCAGCTGCTCTCAGCAGTGCACCACAGGTTCCTTCAATGAGCACCAAGGGAGCTGCGTCATCAGCTTTGGACGGTCGCGGAGGTTATTCGGATTCACCTAAATTTGGTCCTGGTGACTATATCCCATCATCGAGCCATGGATACGGCCACAAGTCTGATCAATTGTATGGTGACAAGAGTTTGGATTATTCTGGAATAGATAGGAGACAATATGGTGAACGGCAGAGTGGTTATCTTGGTAGGGACTTACCAAGTGAACAAACTGCGCGGTATGCTGCTGATGCTGTTGGATATAGTGGTCAACATCAGCAAGCAGAAATATATGACCGAATTGATCAGGCAGCTTTGTTACGACAAGAGCAACTGCTGAAAGCTCAGTCTCTACAAGCCGCCTCACTTGAAGGGGGTACTAGACAAGCTGATTACCTTGCAGCAAGGACTGCTGCTAGTCGTCACCCTACCCAAGATCTCATGTCCTATGGAGGAAGGATGGATTCTGATCCCCGTGCGTCTTCAATGCTAAGCGCTACTTCATATAGTGGACAACACGCACCATCCATCTTAGGAGCAGCTCCAAGGAGAAACGTGGATGATCTCCTGTATTCCCAGAATGCATCAAATCCTGGTTATGGAGTGAGCCTGCCTCCTGGTAGGGACTATGCCACTGGAAAAGGTCTTCATGGAAATTCTATGGAGTTGGATTATCCAGGAAATCTGCTGTCACAAGGTGGGCACAATGACCGTAAGGATGATCGGGCTAGCTATCTACGGGAATTTGAACTAAGGGAAGAAGAGCGTCGCCGTGAACGCTTGCGTGAGAGGGATAGAGATAGAGACAAGGATAAAGAACGTGAACGATTGCGAGAACGTGAACGAGAACGGGAACGTGAAAAGGAGCGCCTTTTGGAGCGACGGGAAAAGGAAAGGGAGCGAGATCGCAAACGCGCAGTTGAAGTTAAGCTTGAACGAACTCCAGTGAGATCCTCCAAGGATCCCCGTGGTACTTCAAAAGATCGTCGTGGGTCGTCTTTGACAAAGGAAGGGAAATCTGCACGACGGGACTCACCGCATCACAGTGCTTTACATAGGCACCGTTCACCTGTTAAAGAAAAACGGAGAGAATATATCTGCAAGGTGTACCCTTCTCGTTTAGTGGATATTGACAGGGATTACCTTTCAATAGATAAGCGATACCCCAGACTCTTCGTCTGTCCTGAGTTGTCTAAGGTTGTTGTGAACTGGCCAAGAGAAAACCTTAAATTGTCTATCCATACTCCTATCAGTTTTGAGCATGATTTTGTTCAAGAAGAAAGTGCCATTGAGCCTAGAGACACATCCACCAAGCTTTTGAATGGACAACCTCCAAATTCAGAACAAGGAAATACGGTTTGGAATGCCAAAATTATTTTGATGAGTGGGCTTAGTAGGACTGCATTGGAGGATCTGTCATCTGATAAAATTTTTGATGATCGCATTCCTCATATTTGTAATTTCCTTAGGTTTGCGGTCCTTAAGAAGGACCATTCTTTCATGGCAGTTGGTGGTCCATGGGAACCTGCTGATGGGGGAGATCCTTCTAATGATGATAACTCTTTGATCAAGACAGCCCTAAGATATGCGAAGGATGTTACTCAGCTGGACTTGCAGAAGTGCCAACACTGGAACCGTTTTCTTGAGATACATTATGATAGATTTGGCAAAGATGGTTTCTTTAGCCACAAGGAAGTCACTGTTCTTTATGTTCCCGATTTGTCTGACTGCCTCCCTTCCTTGGAAGAATGGCGTGGCCAGTGGCTTGCCCACAAGAAAGCTGTGGCTGAAAGAGAACATCAACTTCAACTTTCTTTAAAGAAAGAGAAATCAAGAGATAATAGGGAAGCATCCAAAGATAAGAAGAAAGATTCTGCTGCATCTGGACAATCAGGAGTTGTTAAGAAGGAGGAGAAAGATAGTATTATTGTTAAGGAGGAAACTGAGGAAAAACCTGGAGTGAGTAACAACAATAAGATTGCTAAAGTTGATGCCTCGGATATAGGTGAAGACAAGAATGAGAAGAAACTGGGGGAAACTGCCACTGGTCAAATCACAGGCAGTGTGAAGACTGTGAAAAAGAAGGTTATAAAGAAGGTTGTGAAACAAAAAGGTGCCATTAAGGCAAATGATAGTGCCACCCAACAAATGGATAAATCAGGTGTGAAGGATGCTGCAGAGGAAGCAGCAGCATCAGATGTTCCTAATCAGGAGGACAAGTCTTCTGTGGATCCTACTAGGATTCACACATCAGATGTTTCTACTGGAAAAACTGATGGTGAAGAGGGGAAAGGTAAGGAAATAAACAGTTCTGGAGATAAACCTCAGGACAACCCTGATTCAACAGTTAATGCAGTTACAAATGATGCTTCTGTGAAAATTACAAAAAAGAGAAAAATAATCAAGCGGGTACCTAAAAAAAAGGTTGTTGGTGAGGCATCTAAATCTGCAGTTTCTGACCCTAAAAATGAAGGGAATGTTGTGGAAGATAAAGCAGTGGATAGTAACCAAAGCACTGGCAAGCAGACTGCCGCTGCAGATGCCACTGTGACGGAGCCAAAAAAATCTGTTAAGGTTGTCCCTAAGAAAAAGTTAAAAACACCCACCTCTGGGAAGCAAGGTGGTGCAGCTGATTCCAATAAAGCAGAAACAAAGTCTGATAAAAAGGATGAAGGTAATGTTGTTGCTATTCAAGCAAAAGATGAGTCAGAGAGCTCTGGCAAGCAGCCTCCTGTTGCAGATACAAAAGTGACGCCAGAGGTGAAAAAAACTGTGAAGGTAGTTCCTAAAAAGAAATTGAAGGCACCTGCCTCTGAGAAGCAAGGTACAGCTGATTCCAATAAAACTGAAATGAAGCCTGACAAGGATGATAAAGGAACTGGTGAAAAAAGTGGAGCCAAGACAGACAAGCAGAAAACCTCTGAAAAGAGTCCTCAGAATGTTAAGGAGAAACAGAAAGATGGGGATAAGTCAGGTGAGAAAGTAACCAAAGGTAGAGATGGAAAAGTTGATCCTAAAAGCAAATCTAGTAAGGAAGTTAAAGAGAAGAGGAAGTCTGAGGAACCTCCTCGACACCCTGGATATATTCTTCAAACAAAAGGGACTAAGGATTCTAAGCTACGCTCATTATCATTGTCTCTGGATTCATTGTTGGATTATACTGACAAAGATGTTGAAGAATCAACACTTGAGCTTTCATTGTTTGCTGAATCATTTAATGAAATGCTCCAGTATCAAATGGGTTGCAGAATTTTGACATTTCTTCAGAAACTCCGTGTAAAATTTGTGATCAAAAGAAATCAGCGAAAGAGGCAGCGGGAAGAAAGGTCTGAGAAGGATAATGCTGACAAAACACCTGCTAAACGTCCAAAGGGAGATGATGCTTCTGTCAAGACGGAGGCGACAAATACGGACACACCGAACTCAACCCAAGCAGATGATAAAACTGTTGATGTTGATAAAACTGTTGATGTTGATAAAACTGATGATGTTGATAAAACTGCTGATGAGAATACTAACCCTAGTGAGAAGGAGAATGATTTGAAGATGGAAGATGCAACAGACGAGGAAGAAGATCCAGAGGAGGATCCAGAAGAATGTGAGGAAATGGAAAATGGTGGTCCCAAGCATGATGCATCCAATGATAAAGATGCTGAGCAAGAGGCCGACTTAAAAGTTGAATCTGAAAATGTTACTAGCAATGAAAAAGCAGCAGATGAAACGTCTAAAGGGGAGATTGTGGTTAAAAATGAGGTCAAAGAAGCCAAAACAGATGTTCAATCCAATGAAGAAAAGGAAGGAAAGGCTGAAAAAATTAAAGAAACTCCTGCTGTTAAGGAGGTCGCTGTGGACAAAGAATTGTTGCAGGCTTTCCGGTTTTTTGATCGTAATCGAGCTGGGTACATTAGGGTTGAAGATATGAGATTAGTTCTTCACAATTTAGGGATGTTCCTTTCTCACAGGGATGTCAAGGATCTTGTACAAAGTGCATTGTTGGAGAGCAACACTGGGAGGGATGATCGAATTCTTTACAATAAGCTGGCGCGGATGAGTGAACTCTGA 4332 0.437 MYSSRGSGGGGGAYGQSYTGQSTYGQNLGANYSGSSVGGHDVTQHSVASRHSAILGGQQEVDVAGYRPAQYGGQYSSVYGSAALSSAPQVPSMSTKGAASSALDGRGGYSDSPKFGPGDYIPSSSHGYGHKSDQLYGDKSLDYSGIDRRQYGERQSGYLGRDLPSEQTARYAADAVGYSGQHQQAEIYDRIDQAALLRQEQLLKAQSLQAASLEGGTRQADYLAARTAASRHPTQDLMSYGGRMDSDPRASSMLSATSYSGQHAPSILGAAPRRNVDDLLYSQNASNPGYGVSLPPGRDYATGKGLHGNSMELDYPGNLLSQGGHNDRKDDRASYLREFELREEERRRERLRERDRDRDKDKERERLREREREREREKERLLERREKERERDRKRAVEVKLERTPVRSSKDPRGTSKDRRGSSLTKEGKSARRDSPHHSALHRHRSPVKEKRREYICKVYPSRLVDIDRDYLSIDKRYPRLFVCPELSKVVVNWPRENLKLSIHTPISFEHDFVQEESAIEPRDTSTKLLNGQPPNSEQGNTVWNAKIILMSGLSRTALEDLSSDKIFDDRIPHICNFLRFAVLKKDHSFMAVGGPWEPADGGDPSNDDNSLIKTALRYAKDVTQLDLQKCQHWNRFLEIHYDRFGKDGFFSHKEVTVLYVPDLSDCLPSLEEWRGQWLAHKKAVAEREHQLQLSLKKEKSRDNREASKDKKKDSAASGQSGVVKKEEKDSIIVKEETEEKPGVSNNNKIAKVDASDIGEDKNEKKLGETATGQITGSVKTVKKKVIKKVVKQKGAIKANDSATQQMDKSGVKDAAEEAAASDVPNQEDKSSVDPTRIHTSDVSTGKTDGEEGKGKEINSSGDKPQDNPDSTVNAVTNDASVKITKKRKIIKRVPKKKVVGEASKSAVSDPKNEGNVVEDKAVDSNQSTGKQTAAADATVTEPKKSVKVVPKKKLKTPTSGKQGGAADSNKAETKSDKKDEGNVVAIQAKDESESSGKQPPVADTKVTPEVKKTVKVVPKKKLKAPASEKQGTADSNKTEMKPDKDDKGTGEKSGAKTDKQKTSEKSPQNVKEKQKDGDKSGEKVTKGRDGKVDPKSKSSKEVKEKRKSEEPPRHPGYILQTKGTKDSKLRSLSLSLDSLLDYTDKDVEESTLELSLFAESFNEMLQYQMGCRILTFLQKLRVKFVIKRNQRKRQREERSEKDNADKTPAKRPKGDDASVKTEATNTDTPNSTQADDKTVDVDKTVDVDKTDDVDKTADENTNPSEKENDLKMEDATDEEEDPEEDPEECEEMENGGPKHDASNDKDAEQEADLKVESENVTSNEKAADETSKGEIVVKNEVKEAKTDVQSNEEKEGKAEKIKETPAVKEVAVDKELLQAFRFFDRNRAGYIRVEDMRLVLHNLGMFLSHRDVKDLVQSALLESNTGRDDRILYNKLARMSEL* 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1180 1443 MobiDBLite consensus disorder prediction 29 53 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 1237 1272 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 1035 1114 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 1222 1236 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 844 863 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 723 743 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 691 716 - -
Lja2g1180 1443 Pfam LAIKA domain 1113 1178 IPR045353 -
Lja2g1180 1443 PANTHER CCAR1 HOMOLOG 10 829 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 971 987 - -
Lja2g1180 1443 Pfam BURAN domain 468 553 IPR045354 -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 1273 1292 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 691 1129 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 1009 1028 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 1189 1339 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 920 936 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 1 20 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 343 449 - -
Lja2g1180 1443 Coils Coil 360 391 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 1293 1339 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 343 435 - -
Lja2g1180 1443 Pfam DBC1 574 690 IPR025954 -
Lja2g1180 1443 Gene3D - 1373 1441 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 1191 1221 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 864 881 - -
Lja2g1180 1443 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 967 1441 IPR025224 GO:0006355
Lja2g1180 1443 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 10 829 IPR025224 GO:0006355
Lja2g1180 1443 MobiDBLite consensus disorder prediction 313 332 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 87 134 - -
Lja2g1180 1443 MobiDBLite consensus disorder prediction 754 768 - -
Lja2g1180 1443 ProSiteProfiles EF-hand calcium-binding domain profile. 1372 1407 IPR002048 GO:0005509
Lja2g1180 1443 SMART DBC1_2 572 697 IPR025954 -
Lja2g1180 1443 PANTHER CCAR1 HOMOLOG 967 1441 - -
Lja2g1180 1443 SUPERFAMILY EF-hand 1375 1420 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1180 396 715 EF-hand Containing Proteins AT2G03150 57.447 1.93e-116 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1180 K25827 - gmx:100790366 1308.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1180 2 11197912 11206152 Lja2g1180 2 11197912 11206152 ECH