Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1178 ATGGGAAGGATTGGACTGTTTGATCTTGAAAAACATTTTGCTTTTTATGGAGCTTACCACAGCAACCCAGTTAACATAGCAATCCATGTGTTGTTCGTTTGGCCTATCTTTTTCTCAGCTCTTCTTATTCTATACTTCATCCCTCCCTTCTTCAACCTTCCAAATTTGGAGTTTTTCCTCTGGGGGAACCATGTGATTTTGGTGTGGAATGTTGGGTTCTTGGTTGCTTTAATTTACGCAGTTTTCTATGCTGCTTTGGATCTCAAAGCTGGTTCATTGGCTGCTTTGCTTTGTGCTGCTTGTTGGGTTGGTAGCAGTTTTGTTGCAAGCCAACTTGGGTTACCTCTTGCTTGGAAGGTTGTTCTGGTGATTCAGATAGTGTGTTGGATAGGGCAGTTCATTGGTCATGGAGTATTTGAGAAACGAGCACCTGCTCTTTTGGATAACCTCATTCAGGCCTTTGTAATGGCTCCTTTCTTTGTATTGCTGGAGGCTCTCCAAACTTTATTTGGTTATGAGCCATATCCAGGATTTCATTCAATAGTGCAAGCAGAAATTGAAGCTAATATCAATGAGTGGCAGGAAAGTAAGCAGAAACTAATTTCATAG 609 0.4122 MGRIGLFDLEKHFAFYGAYHSNPVNIAIHVLFVWPIFFSALLILYFIPPFFNLPNLEFFLWGNHVILVWNVGFLVALIYAVFYAALDLKAGSLAALLCAACWVGSSFVASQLGLPLAWKVVLVIQIVCWIGQFIGHGVFEKRAPALLDNLIQAFVMAPFFVLLEALQTLFGYEPYPGFHSIVQAEIEANINEWQESKQKLIS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1178 202 Coils Coil 183 202 - -
Lja2g1178 202 PANTHER YGL010W-LIKE PROTEIN 1 202 - -
Lja2g1178 202 PANTHER DUF962 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_8G05310) 1 202 IPR009305 -
Lja2g1178 202 Pfam 2-hydroxy-palmitic acid dioxygenase Mpo1-like 8 168 IPR009305 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1178 Lja-Chr2 11188028 11190441 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1178 - - gmx:100306243 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1178 2 11188028 11190441 Lja2g1178 2 11188028 11190441 ECH