Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1175 ATGTCAGAGGCTAAAGATGTTGAGGATTTGAAGAATTCTCCTGAAGGTGACGTTAACTCCCATGATTCTGGGGATGATCTCAAAGAATCAGATAAAGATCAAAATGATGAAAGCCCCATGCCTTCACCTCAGCAGGAGGAAGAAGCTGTGAAGAAGAAGTATGGAGGGATGTTGCCAAAGAAGCCTCCACTAATATCTAAGGATCATGAACGTGCTTATTTTGATTCTGCTGATTGGGCTTTAGGGAAGCAAGGAGCAAATAAGCCTAAAGGACCACTTGAAGCACTTCGCCCGAAGTTGCAGCCAACACACCAGCAGGCCCGTTCAAGGCGCTCAGCTTATGCTCCATCAGATGATTGTGAAGGAGTTGATAATGCGTCTGCAGCGGATGATAGTGCTGCTGAACATGTTGACGACGATAAAAATGATACTGCTCAGGACCAAAGCTGTCATTAA 456 0.4518 MSEAKDVEDLKNSPEGDVNSHDSGDDLKESDKDQNDESPMPSPQQEEEAVKKKYGGMLPKKPPLISKDHERAYFDSADWALGKQGANKPKGPLEALRPKLQPTHQQARSRRSAYAPSDDCEGVDNASAADDSAAEHVDDDKNDTAQDQSCH* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1175 151 MobiDBLite consensus disorder prediction 82 151 - -
Lja2g1175 151 MobiDBLite consensus disorder prediction 131 151 - -
Lja2g1175 151 Pfam cAMP-regulated phosphoprotein/endosulfine conserved region 42 113 IPR006760 -
Lja2g1175 151 MobiDBLite consensus disorder prediction 1 36 - -
Lja2g1175 151 PANTHER ENDOSULFINE 19 135 IPR006760 -
Lja2g1175 151 MobiDBLite consensus disorder prediction 1 69 - -
Lja2g1175 151 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 19-RELATED PROTEIN 19 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1175 Lja-Chr2 11168613 11170958 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1175 - - gmx:100801094 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1175 2 11168613 11170958 Lja2g1175 2 11168613 11170958 ECH