Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1163 ATGAAACTCAGCATTTCGTTTTTGGCCAAGCTTTTGATACTGCAATATCTATCAGTTCAATGCCTTTCTGATGATTTTGATTTCTTCTACTTTGTTCAGCAGTGGCCAGGAGCATATTGTGACAGCAAGCAAAGCTGCTGTTATCCCAAAACTGGAAAACCTACAGCAGATTTTGGCATTCATGGACTCTGGCCTAACTACAATGATGGCTCATGGCCCTCAAACTGTGATCCTGACAGCACCTTTGATAAATCTGAGATCTCAGAACTCATTAGTAGCATGGAGAAGAGTTGGCCATCCCTGAGCTGCCCCAGCAGCAATGGCATTAGGTTCTGGTCACATGAGTGGGAGAAACACGGTACCTGCGCGGAATCTGAGCTCGGTCAGCGAGAGTATTTTGAAGCCGCTCTCAAACTGAAGGAGAAAGTGAACCTCCTTCAGATCCTCAAGAATGCAGAGATTCAACCAGATGATGAATTTTACAGCATAGAGAGCATTAAAGATGCTATAAAAGAGGGAAGTGGGTTCACCCCAGGAATTGAGTGTAACAGAGATTCACGTGGTAACAGCCAGCTTTACCAAGTTTACATGTGTGTGGACACTTCTGGATCAGATTTCATAGAGTGCCCTGTTTCTCCAAGGAGCAAATGTGGTTCAGATATACAATTCCCCAAGTTTTAA 681 0.4405 MKLSISFLAKLLILQYLSVQCLSDDFDFFYFVQQWPGAYCDSKQSCCYPKTGKPTADFGIHGLWPNYNDGSWPSNCDPDSTFDKSEISELISSMEKSWPSLSCPSSNGIRFWSHEWEKHGTCAESELGQREYFEAALKLKEKVNLLQILKNAEIQPDDEFYSIESIKDAIKEGSGFTPGIECNRDSRGNSQLYQVYMCVDTSGSDFIECPVSPRSKCGSDIQFPKF* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1163 226 Pfam Ribonuclease T2 family 26 209 IPR001568 GO:0003723|GO:0033897
Lja2g1163 226 PANTHER F7A19.32 PROTEIN 5 226 - -
Lja2g1163 226 ProSitePatterns Ribonuclease T2 family histidine active site 2. 111 122 IPR033130 -
Lja2g1163 226 PANTHER RIBONUCLEASE T2 5 226 IPR001568 GO:0003723|GO:0033897
Lja2g1163 226 CDD RNase_T2_euk 26 220 IPR033697 -
Lja2g1163 226 ProSitePatterns Ribonuclease T2 family histidine active site 1. 58 65 IPR018188 GO:0003723|GO:0033897
Lja2g1163 226 SUPERFAMILY Ribonuclease Rh-like 21 225 IPR036430 GO:0003723|GO:0033897
Lja2g1163 226 Gene3D - 20 226 IPR036430 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1163 Lja-Chr2 11048329 11049964 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1163 K01166 - gmx:100778239 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1163 2 11048329 11049964 Lja2g1163 2 11048329 11049964 ECH