Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1152 ATGTATGGTTTTGTGAATGATTCTGTTTGCGGAAACATGGCATTGGCTTTTGGTTCTCTGAGGGTTTTCATCTGCAGCTATGTGCTCTATTCGTTTGGGTTGATACAAAGATACATCATCAGGTTTTTTCATGGAGGTGATCCGAAAAGCGAGGTTATTGTTCCGGAACCATTGTCACTAGAAGATGAATCAGAGAGGTACCAGATTCCTGGTTTTGGAGAAGAGCTGGCTAATTTTCTGTTTTGGAGTGAAGATTTTCATGGAGGAAGTGAAGAGAGGGGTGGGGAAACAGAGTGCTCTGCTTTCTTGGAGAATATTCCTGAAGAAATTGAGGAAATAGATGGAGAAACAGAGTTCTCAGATTGCCACTCTGAAATTTGTGAAGATGAAATGGATAGTGGAAAAGAGGAAAATGAATCTGATATCATGGAGAGTGATGCTGCTAACTCTGTTGTTCATGATGATGGTAAGGAAATAGATGAAGATGAAACAAAGAGTTCTGTTACTATTGAGAATGTCTCTAATCTTCATCGTGATAGTATGAGGAAAGAAGAAGAAAAAGATGAAGAAATAGGAGGAGCTATTATAGTTCAGAATTACTCTGATGTCCATGAAGATGGAGTGGAAATTGTTGAAAATGAAACAGATTGCTCTGTTTTCATGGAGAATGTCTCTGGTGAAAATGAAAATGTCAACAAATTAGATGAATATGAAACAGAGAGCTCTGTTTTCAAGGATCATGAGCCTAATCTCCATGATGAAGGCAAGGGAGATGAAGAAACAGAGAAGTTTTCAGGTAGAGAAGCTATCAGTGCCTTCATGGAAGAGCCAACAACATTAAGATTCAGTTTTCGAGACTTTTACATGAGTCCAGCTGTTTCATCCGCTTCTGATGACTCATATGCCAATGCTGAAATTGTTGCTGATAAGGAGTTTTCAGAGCTTGATTCAGAGAAAGACAGTGTAGCAGCTCAAGAAGAAGAAGTGGAATCTGTTCAAGAGCAGTTTTCACTCCCTTCCACCACTATTCCACTTCACTTTGGGAATGAAGTGTTTGGTGAAACTGATTCATCAGATGAAGATTACTTCCTTTTCAATGAAAACTCAGTAACATCTGATTCAGAGTCAGAATCATCTAGCTCAAGTGGTCTAATCTGGGGCATCAGTGACAAAATCGATGATTCAATTTCATACCAGTTTCTGGGTGGTAAAATTGTCGGTGAAGGATTTGAGCCTGAGATTCTGAAGCTTATTATGAGAGAGGAAAGACCAGAGGATATGGATGAAAAGCAATCTTCACTTGATAGAAATTTTTCAGAATTTGGATTTCATGGTGTTTATTCTGAAGATGGGTATATTGAAATAGAACCTGGCATGAAGAGCTTTAAGTCATTGAATGTGCATGATTTTGGTGATGTACCAGAATCTGATGAGCAAGATGAGGATGATTTTGAATGGGAGCATGAGGATATAGTGGAACAGCTGAAAGTGGAACTGAGAAATTCAAGGCAAGGAGGACTTCCCACAATCATAGAAGATGAAGAGGATGAGGAAACTGAGTCCCCAAAAGTGGTTGAAAAACTAAGACCACTGAAAATTGAAGAGAAGCTCGAATACAAGGATCAAATTGCTGAAATTGAAAAGGTTTACAAGATCTATGCAGAGAAAATGCGGAAACTGGATATCTTGAATTACCAGACCATGCATGCATTAGGTCTTCTTCATCTAAAAGACCCTCTTAAATCAATTTCAATACCAAAATCCACCATCTCAGGTGCTAAGCCTGTAATCTCTCAGAATTTGTGGCCACGCAAAGCGGCAAAGAACATATCTGACCCACTGCTTAAGCTTGTTCATGACCTGCATAGAGATTTGGAACTGGTTTATGTCGGGCAGGTTTGCCTCTCCTGGGAAATCCTGTGTTGGCAACACCAGAAAGCCATTGAATTGCAAGAGTATGATTCACAAGGGTCTCACAGGTACAACCATGTTGCTGGTGAGTTTCAACTTTTTCAAGTCCTGGTGCAGAGATTCATAGAGAATGAACCATTTCAAGGTGGCCCTAGGATTCAGAATTATGTCAAGAACCGTTGCGTGATTCGGAACCTGCTCCAAGTTCCAGCCATTAAAGATGATAGTAAAGGGGGTGAGGAGGAGGATGCTATTGCAAGTGGAAGGTTAGAAGATATCATCAAGGAATCCATGAGAGTGTTCTGGGAATTTGTCCGCGCAGATAAAGATTATGGGAATGTGGTTCTTAAAGTTCCTAAGCATATTGGAACTGATCTCAAAGACCCGGCAATTTCAAATCTTCTCGTGGATATTCGAACGCAATTACAAAAGAAGGAGAAAAAGCTCAAGGACATTGTGAGAATTGGGAATTGCATAGTGAAGAAGTTCCAAAAGCACCATGAGGATCCACTTGATCATGAGCAGCTAGTAGCTCAGGTTGGGTTGAGATTGATTTCAAGGGTGGTAAACGTGTCAAAGTTGAGAAAAGAACAGATAATATGGTGCCATGAAAAATTGCACCGAATCAAATTTTTGAGCAGGAAGATCGTCCAGGTTGAACCTTCTTTTTTGCTGTTTCCATGTTGA 2598 0.3999 MYGFVNDSVCGNMALAFGSLRVFICSYVLYSFGLIQRYIIRFFHGGDPKSEVIVPEPLSLEDESERYQIPGFGEELANFLFWSEDFHGGSEERGGETECSAFLENIPEEIEEIDGETEFSDCHSEICEDEMDSGKEENESDIMESDAANSVVHDDGKEIDEDETKSSVTIENVSNLHRDSMRKEEEKDEEIGGAIIVQNYSDVHEDGVEIVENETDCSVFMENVSGENENVNKLDEYETESSVFKDHEPNLHDEGKGDEETEKFSGREAISAFMEEPTTLRFSFRDFYMSPAVSSASDDSYANAEIVADKEFSELDSEKDSVAAQEEEVESVQEQFSLPSTTIPLHFGNEVFGETDSSDEDYFLFNENSVTSDSESESSSSSGLIWGISDKIDDSISYQFLGGKIVGEGFEPEILKLIMREERPEDMDEKQSSLDRNFSEFGFHGVYSEDGYIEIEPGMKSFKSLNVHDFGDVPESDEQDEDDFEWEHEDIVEQLKVELRNSRQGGLPTIIEDEEDEETESPKVVEKLRPLKIEEKLEYKDQIAEIEKVYKIYAEKMRKLDILNYQTMHALGLLHLKDPLKSISIPKSTISGAKPVISQNLWPRKAAKNISDPLLKLVHDLHRDLELVYVGQVCLSWEILCWQHQKAIELQEYDSQGSHRYNHVAGEFQLFQVLVQRFIENEPFQGGPRIQNYVKNRCVIRNLLQVPAIKDDSKGGEEEDAIASGRLEDIIKESMRVFWEFVRADKDYGNVVLKVPKHIGTDLKDPAISNLLVDIRTQLQKKEKKLKDIVRIGNCIVKKFQKHHEDPLDHEQLVAQVGLRLISRVVNVSKLRKEQIIWCHEKLHRIKFLSRKIVQVEPSFLLFPC* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1152 865 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 3 865 - -
Lja2g1152 865 PANTHER OS09G0413600 PROTEIN 3 865 - -
Lja2g1152 865 Coils Coil 315 335 - -
Lja2g1152 865 MobiDBLite consensus disorder prediction 241 263 - -
Lja2g1152 865 Pfam Protein of unknown function (DUF1666) 623 864 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1152 Lja-Chr2 10976370 10980874 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1152 - - gmx:100784525 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1152 2 10976370 10980874 Lja2g1152 2 10976370 10980874 ECH