Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1148 ATGGCATCTTGCTCATGCTCTCTTCTTCCATCCCCATCGCCACAACAACAAGCTGTTTTGGCCAAAACCATCATCATCCAAACAAGTCTCTGCATTTCTTGCCAATCTCAGTACTACCCACATTCGCTATTTCGCTTGCGTTCGCGTTCTTCTCAAACGCTTCGCCTCTTCATCTCTCCACCTAAATCCAAAACCAAGCTCCAAGCACACCAAAGGGATTTTGGACCGGATTGGCCTATTCTTCGCAGATGGGAAGTGCCTTGGCAATGGCAAACATTTTCACTAACATCTATTGCTTGCGCATTAAGGTTTGTGTTTCAGATAGTAGCTACTTTCATGATCATCATGTATAAAATCTGCGTCCTTTTGAGTGTTTGGCTTGAGGTAAATGCTCTACAATCTCTAGAGGTTGAAGGTGATGAACTCAGTTCAGATGAGGAGGCAGTGATTTTTCTTGTCAATCATAGCTTCGCAACTGCCATTGTACTTCAAGTTCTTTATGGTATTACCAACATGTACCAGCCACTCCCACAAGACTTCTTCAAATATGACTGGAGGGAGCCTTTCAATCTTCAGAAGGGGTGGCTTTTGTGGGGAGGAGTAGGACTTGCTGGTGCCCTGATTGTCATTGCATTGCCAGGTGCTGCCATGTCCTTCTTCAGTGAGGAAAGTCAGGAAACCTCAACCAGAAAGACGGACACCCTTGTTCGTTTGCTTCCGGTTGGATCTTCATATGTCAGGTACCTTTCAACTGCTTGCGTGATGGCCAGCACGGGTCTTCTTGCTCCACTTCTTGAGGAGACTGTATTTCGAGGCTTTGTTATGGCTTCCTTGACTAAGTGGGTTCCTACGCCAGTTGCTGTCCTCATTAGTGCTGCGGTGTTTTCTCTTTGCCACTTCACTCCTGGAGTATTTCCATGGCTGTTTGTTTTAGGGACTTTTTTGGGGATTTCATATGCTCAAACTCGCAACCTCCTCACTCCAATCACTATTCATGCTTTCTGGAACATAGGACTTTTGATTCTGACTTTGCTCCAGGTATCCTCTGATTGTCAAAGAATCTCTTGA 1068 0.4532 MASCSCSLLPSPSPQQQAVLAKTIIIQTSLCISCQSQYYPHSLFRLRSRSSQTLRLFISPPKSKTKLQAHQRDFGPDWPILRRWEVPWQWQTFSLTSIACALRFVFQIVATFMIIMYKICVLLSVWLEVNALQSLEVEGDELSSDEEAVIFLVNHSFATAIVLQVLYGITNMYQPLPQDFFKYDWREPFNLQKGWLLWGGVGLAGALIVIALPGAAMSFFSEESQETSTRKTDTLVRLLPVGSSYVRYLSTACVMASTGLLAPLLEETVFRGFVMASLTKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIGLLILTLLQVSSDCQRIS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1148 355 Pfam Type II CAAX prenyl endopeptidase Rce1-like 254 337 IPR003675 GO:0004222|GO:0016020|GO:0071586
Lja2g1148 355 PANTHER CAAX AMINO TERMINAL PROTEASE 47 344 - -
Lja2g1148 355 PANTHER CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN 47 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1148 Lja-Chr2 10949741 10955458 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1148 K07052 - lja:Lj2g3v1279990.1 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1148 2 10949741 10955458 Lja2g1148 2 10949741 10955458 ECH