Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1147 ATGGCAAAGCCAAGTTCAGCTGATAGTAGGACTAGAAGCTCTGTGCAGATCTTTATAGTAGTTGGTTTATGTTGTTTCTTCTATATATTGGGCGCATGGCAGAGAAGTGGTTTTGGAAAGGGAGATAGTGTAGCATTGGAGATTACCAAGAAAGGTGCAGACTGTAATATAGTTCCGAATTTAAGTTTTGACTCTCACCATGCTGGTGAAGTTAGCAAAATTGATGAGGTTGATTCAAAACCTAAGGTATTTAAACCTTGCAAGGCTCGTTATACTGATTACACTCCCTGCCAAGATCAACGGCGTGCCATGAACTTTCCTAGAGGAAACATGGTTTATCGAGAGAGGCACTGCCCGCGTGAGGAAGAGAAGTTACACTGTTTGATCCCAGCACCTAAAGGGTATGTGACTCCATTTCCATGGCCAAAGAGCCGTGATTATGTTCCGTATGCAAACGCACCCTACAAGAGCCTTACAGTTGAGAAGGCTATTCAGAACTGGATCCAATATGAGGGAAATGTGTTTAGATTTCCTGGTGGTGGAACCCAATTTCCTCAAGGTGCCGATAAATATATTGATCAACTTGCTTCTGTGATACCTATGAAAAATGGGACAGTTAGGACAGCCCTGGATACTGGTTGTGGGGTTGCCAGTTGGGGTGCGTATCTTTGGAGCAGAAATGTTGTGGCCATGTCATTTGCACCAAGGGACTCTCATGAGGCACAAGTACAGTTTGCTCTAGAAAGGGGTGTACCTGCAGTCATTGGTGTTCTGGGAACCATTAAATTGCCGTATCCATCTGCAGCCTTTGACATGGCACATTGTTCTCGCTGCTTAATTCCTTGGGGAGCAAATGATGGAATATATATGATGGAAGTTGACCGAGTTCTAAGACCTGGTGGTTATTGGGTGCTTTCGGGTCCTCCAATCAATTGGAAGGTTAATTACAAATCCTGGCAGAGGCCAAAGGAGGAACTCGAGGAAGAACAAAGAAAGATTGAAGAGGTTGCTAAGCTCCTTTGCTGGGAGAAGAAGTCAGAGAAGTCTGAAATAGCCGTCTGGCAAAAAACTGTAGACTCTGAATCATGCCGAAGTAGACAAGAAGATTCTGGTGTAAAATTCTGTGAATCAACAGATCCTGATGATGTCTGGTATAAGAAAATGGAGGCCTGCGTTACTCCCAATGTTAAAATAAATGGTGATGTTAAGCCATTCCCACAGAGGCTATATGCCATCCCTCCTAGAATTGCCAGTGGCTCTGTTCCTGGAGTTTCAGTTGAGACATACGAGGATGATAACAAAAAGTGGAAAAAGCATGTAAATGCTTATAAGAAAACTAATAGACTCCTGGATACTGGAAGGTATCGCAACATTATGGATATGAATGCTGGTTTGGGTAGTTTTGCTGCAGCTATTCAATCTTCTAAGTTATGGGTCATGAATGTTGTGCCTACTATAGCCGAGAAACAAACACTAGGTGTCATATATCAACGAGGACTTATTGGCATCTATCATGATTGGTGTGAAGCCTTCTCTACATATCCAAGAACATATGACCTCATTCATAGCCATAGTCTCTTTAGTCTGTACAATGACAAATGTAACATAGAAGATATTCTTCTGGAGATGGACCGGATTTTGCGCCCGGAAGGTGCTGTGATATTCCGTGATGAAGTCGATGTGTTAATTAAGGTAAAGCAAATTGTTGGAGGAATGAGATGGGATACTAAAATGGTTGACCATGAGGATGGTCCTCTTGTTCCTGAGAAGATACTAATTGCTGTCAAGCAGTATTGGGTTGCCGATTCAAATGCCACATCAACACATTAG 1830 0.4268 MAKPSSADSRTRSSVQIFIVVGLCCFFYILGAWQRSGFGKGDSVALEITKKGADCNIVPNLSFDSHHAGEVSKIDEVDSKPKVFKPCKARYTDYTPCQDQRRAMNFPRGNMVYRERHCPREEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIPMKNGTVRTALDTGCGVASWGAYLWSRNVVAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSAAFDMAHCSRCLIPWGANDGIYMMEVDRVLRPGGYWVLSGPPINWKVNYKSWQRPKEELEEEQRKIEEVAKLLCWEKKSEKSEIAVWQKTVDSESCRSRQEDSGVKFCESTDPDDVWYKKMEACVTPNVKINGDVKPFPQRLYAIPPRIASGSVPGVSVETYEDDNKKWKKHVNAYKKTNRLLDTGRYRNIMDMNAGLGSFAAAIQSSKLWVMNVVPTIAEKQTLGVIYQRGLIGIYHDWCEAFSTYPRTYDLIHSHSLFSLYNDKCNIEDILLEMDRILRPEGAVIFRDEVDVLIKVKQIVGGMRWDTKMVDHEDGPLVPEKILIAVKQYWVADSNATSTH* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1147 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 445 558 IPR029063 -
Lja2g1147 609 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 605 IPR004159 GO:0008168
Lja2g1147 609 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 596 IPR004159 GO:0008168
Lja2g1147 609 Coils Coil 426 446 - -
Lja2g1147 609 Gene3D Vaccinia Virus protein VP39 181 368 IPR029063 -
Lja2g1147 609 PANTHER METHYLTRANSFERASE PMT2-RELATED 5 605 - -
Lja2g1147 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 336 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1147 Lja-Chr2 10942845 10947073 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1147 - - gmx:100778611 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1147 2 10942845 10947073 Lja2g1147 2 10942845 10947073 ECH