Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1146 ATGGTTATCACAGCTACCCCTTCCAACAGCACCCTCCATCATTTGAAAACTTTCAACTCTCAGAATAACAATAACCTCCTCCGTGATGCTTCCTTCTCTTCATACTTGAACAACAAAGAAGAGACCTTTGCTGACTCAAGCCATCCCTTTACCAGAAAGGATCCTCTTCACCAGGGAGTTAAGAAGGAAGATGATGAAGAAATCGGAGTTTTTGAGGCTGAAAAGTACTTCCATGGAGGAGAAATAGGAAGCCCCAGAGTTGCTATCATTGGTGCTAGTAAGTACCAGCACCAGAAGAAAGAAGAAACGGCTCAAGAAACTAGAAGGTACAAAGTTCTGTATGGAACTCCAAGTGTTCGCTCTGAATCAAGTTTGAACAGCCAGAGTGCACTTTTACCAAGTGTTGTGAATAATTCTTCAAGGAATAGCAAAAGCAAAGCACAAAGGAAGAGTTTTCTAGCTGGTCTTGGTTGCAAATGCTATTGTTCTGATAAGAATTCTGTTGATATCAGTGACCATGCAGCAGGTGAGATCAGTTTTAACAAAGCTGCTACTTATGGTGCAGTTCATGGAAAAAGAACCTCAAAAAAGCTCATCAATACTGATGCAGATTCTAATCATTCAGCTAAAGCAACTAAGCCTCATGCAGAAATCTTCATCAACAAAGATGTCTACTTCCAAAAGCCAGAGAAGTTACCATTCTCAACTGTGAATTCCAGCTCAGGAAATCAACCTTTGAAAGTGCAAATTCAAGTAGAGAAGCCAAGGAAATCGTTGGAAGTGTTTGGATCCCCAATATTGGATAACATAAGCAAGTCCGTGAGCTTTGATAGAAGGCTGTCAATGCCCTCTTGGGAATCTGCAAATTCTGTTGGCAACTTTGATGATGATGCTGCAAGTGATGCAAGTTCAGACCTATTTGAGATTGATAGCTTCACAGGAAAATCCAACCCTTTTCTTGGTAAATCAACTTCCAACATTGCTTCAGGCTGTGCCAGCCCCACAACTTGTTATGCACCAAGTGAGGCAAGCATTGCATGGAGTGTGGTCACTGCCAGTGCTGTGGATTTTGATGATCAAAGGTCAGTAGCAACCATAAGGAGTCCAATCAGGACATCATCCTTAACTTCCTCAAATGTGAAACCGAAAGCCGGCAAAGAGATGCAGAGGAGGCATTCAAGTAATTTGTTGGGTTGCAAGAGCCAGAAGGCTGTGGGAGTTGCTGTTGATGCCTTCACCACATGTGAGAAACCAGGCTCTACCCCACAAATTCGTCGCAAGTCAGAGATGTTCCCTCATGTGACAAAGCTTCAGGGAGGGGCAAAGGAGGAAAATTTTGGTGCAAAACATGGGCAACAACATGTTTATGCCAAGCGCACACCCTCACCACGTGCTTCTTCACAACTACTATACATTTAG 1419 0.4299 MVITATPSNSTLHHLKTFNSQNNNNLLRDASFSSYLNNKEETFADSSHPFTRKDPLHQGVKKEDDEEIGVFEAEKYFHGGEIGSPRVAIIGASKYQHQKKEETAQETRRYKVLYGTPSVRSESSLNSQSALLPSVVNNSSRNSKSKAQRKSFLAGLGCKCYCSDKNSVDISDHAAGEISFNKAATYGAVHGKRTSKKLINTDADSNHSAKATKPHAEIFINKDVYFQKPEKLPFSTVNSSSGNQPLKVQIQVEKPRKSLEVFGSPILDNISKSVSFDRRLSMPSWESANSVGNFDDDAASDASSDLFEIDSFTGKSNPFLGKSTSNIASGCASPTTCYAPSEASIAWSVVTASAVDFDDQRSVATIRSPIRTSSLTSSNVKPKAGKEMQRRHSSNLLGCKSQKAVGVAVDAFTTCEKPGSTPQIRRKSEMFPHVTKLQGGAKEENFGAKHGQQHVYAKRTPSPRASSQLLYI* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1146 472 MobiDBLite consensus disorder prediction 439 472 - -
Lja2g1146 472 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1 5 438 - -
Lja2g1146 472 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 5 438 IPR039615 GO:0009638
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1146 Lja-Chr2 10936146 10937910 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1146 - - lja:Lj2g3v1280010.1 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1146 2 10936146 10937910 Lja2g1146 2 10936146 10937910 ECH