Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1132 ATGGGTCATTCTGACAACAATTTTCTCCAAGTCATCGCCAAGAACTTCGATGTTCTTGCTCTGCCCTTGGTCACCCTTGTTTACCCCTTATATGCTTCAATCAAGGCCATAGAGACCAGGTCCATCACTGATGACCAACAATGGCTCACTTATTGGGTTCTATACTCTATGATCACACTCTTTGAGCTCACATTTGCCAAAGTTCTTGAAGTGCTTGCAATTTGGCCATATGCCAAGTTGATACTGAGTTGCTGGTTGGTTCTTCCACACTTTAATGGGGCGGCACATGTTTATAGGTACTACGTTAGACCATTCTACATGAACCCACAAATGCCACAATTGCCACTGTTGCCCCAAATGCCACAAATGCCAGGAACTTCTCATATGTGGTATGTTCCTCGGAAGAACATATTTAGCAAGCGGGATGATGTTCTTTATGCTGCTGAGAGATACATGGAAGAACATGGAACAGAAGAGTTTCAAAGACTCATAACCAAGGCTGACAGAGAAGCTAGATCAAGGAGGAGTGGCAATCACATGATATTTGATGATGATTATAGATATTAG 567 0.4268 MGHSDNNFLQVIAKNFDVLALPLVTLVYPLYASIKAIETRSITDDQQWLTYWVLYSMITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYRYYVRPFYMNPQMPQLPLLPQMPQMPGTSHMWYVPRKNIFSKRDDVLYAAERYMEEHGTEEFQRLITKADREARSRRSGNHMIFDDDYRY* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1132 188 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Lja2g1132 188 PANTHER HVA22-LIKE PROTEINS 4 187 IPR004345 -
Lja2g1132 188 PANTHER HVA22-LIKE PROTEIN 4 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1132 Lja-Chr2 10826760 10829540 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1132 K17279 - gmx:100306464 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1132 2 10826760 10829540 Lja2g1132 2 10826760 10829540 ECH