Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1118 ATGAAGAACTTCTTGGTTTCTTTATGCTACTTGTTTCCTGCAATCATTGCAATCATTCTTGTGCTGCTTACTCCAATTCCCAGTGCACAGTTAACAACAAATGAGAGCAGAATTCTTCAACAAGTTCAGAACCTTCTTGAATATCCGCAAGTTCTTCAAGAATGGACCAACTCAACCAACTTCTGCAACCTCCCTCCATCTCCTTCTTTCAAGATTCTCTGCACAAATGGCCATGTAACTGAATTAACGGTCATTGGAAACAAGAGCTCTCCATTGAATCTTTCAGAAGGATTCTCCATTGATTTTTTCTTCACTGTCTTGACAAAGCTTTCAAACATGAAGGTGTTGTCATTGGTGTCTATTGGTTTATGGGGTCCTTTACCTTCAAAGATCAGCAGGTTCAGGTCGCTTGAAGTGCTCAACATTAGTTCAAATTTCATTCATGGGGAAATTCCATCATCAATTTCGTCTCTGAAAAATCTCAGAAGTTTGGTTTTGGCTGATAATCTTTTCAATGGGAGTGTGCCTAATCTTAGAAGACTAGCCTCTCTTGAAGAGCTCAATCTTGGTGGCAATAAATTTGGTCCTGAATTTCATTCCAGAAACAAGAATCTTGTGAAGGTTATCTTGAGGAACAATTCTCTGAGATGTCAAATTCCTTCACAACTCATTCACCTTGATAAACTTCAGCTATTTGACATCTCTTCCAATGAAATAGTTGGGAATATCCCATCCTTTCTCTTTTCTCTTCCTTTCCTCCAGTACCTGAACTTGGCAGAAAACCAACTACGCGGTTCGCTTTCTGAGAATGTGTCCTGCAGTTCTGCTCTAACATTTGTTGATATCTCACACAACTTCCTGGTAGGAAAATTGCCATTCTGCATTGGTTCTGAGTCGTCGAATCGAACGATTTTGTATTCTGGGAATTGTTTGTCAACCAGAAACCCCAATGATCAGCATCCATCTTCATATTGCAAGCAAGAGGAGGCCTTAGCAGTCAAGCCGCCACTTAAAAGCCATAAGAATTTGAAGGTGCAACTAAGCTTAGGACTTGGTATTATTGGCGGAGTTGTAGGAATTACAGGGCTGCTGCTTCTACTCACTCTTTTCATCTTGAGGAAGTCCAAAGCAGAAAGAGCAGATAGTAACAATGACAGATCTTTGGATGATGATAAAATTTCTGTCCATGAATGTCCAAGACCAAATGTTAATTCAAGAAGTGTTCCTCAGTTAATGAGGCTAGCTGCAGGATTTCCAGCATACAACATTTTCACACAAGAAGAAATTGAAGATGCAACCAACAACTTTGACCCTTCAAATTTGATAGAAGGATCAGAGGGACAGCTATATAAAGGTTGGCTCAGAGATGGTTCAAAGGTCATGGTTAATTGTGTGCAACTAAAGCAGAAGAGTTTGCTCAAGAACAGTGTTCAGTGCTTAAAGGTCTTGCCATGTTTAAGGCACAGGCATTTAGTGAGTGTTCTAGGACACTGTGTCGTTACTTATTCAGAACGTCCCCAAACTACAAGCATGATATTCATTGTATTTGAGCACATCACAAACGTGTCTTTGAGGGATCATCTTACAGGTAAACATTCTCAAACATAA 1608 0.3986 MKNFLVSLCYLFPAIIAIILVLLTPIPSAQLTTNESRILQQVQNLLEYPQVLQEWTNSTNFCNLPPSPSFKILCTNGHVTELTVIGNKSSPLNLSEGFSIDFFFTVLTKLSNMKVLSLVSIGLWGPLPSKISRFRSLEVLNISSNFIHGEIPSSISSLKNLRSLVLADNLFNGSVPNLRRLASLEELNLGGNKFGPEFHSRNKNLVKVILRNNSLRCQIPSQLIHLDKLQLFDISSNEIVGNIPSFLFSLPFLQYLNLAENQLRGSLSENVSCSSALTFVDISHNFLVGKLPFCIGSESSNRTILYSGNCLSTRNPNDQHPSSYCKQEEALAVKPPLKSHKNLKVQLSLGLGIIGGVVGITGLLLLLTLFILRKSKAERADSNNDRSLDDDKISVHECPRPNVNSRSVPQLMRLAAGFPAYNIFTQEEIEDATNNFDPSNLIEGSEGQLYKGWLRDGSKVMVNCVQLKQKSLLKNSVQCLKVLPCLRHRHLVSVLGHCVVTYSERPQTTSMIFIVFEHITNVSLRDHLTGKHSQT* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1118 535 Pfam Leucine rich repeat 135 194 IPR001611 GO:0005515
Lja2g1118 535 Gene3D Phosphorylase Kinase; domain 1 415 505 - -
Lja2g1118 535 Gene3D Ribonuclease Inhibitor 32 198 IPR032675 -
Lja2g1118 535 Gene3D Ribonuclease Inhibitor 199 339 IPR032675 -
Lja2g1118 535 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 3 531 - -
Lja2g1118 535 SUPERFAMILY L domain-like 36 317 - -
Lja2g1118 535 SUPERFAMILY Protein kinase-like (PK-like) 416 530 IPR011009 -
Lja2g1118 535 PANTHER OS07G0166700 PROTEIN 3 531 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1118 Lja-Chr2 10604322 10606182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1118 29 529 Miscellaneous Gene Families AT2G02780 46.857 8.99e-126 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1118 - - gmx:100800018 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1118 2 10604322 10606182 Lja2g1118 2 10604322 10606182 ECH